[Savannah-hackers] submission of Spatter - savannah.nongnu.org

[alan . grosskurth]

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Alan Grosskurth <address@hidden> described the package as follows:
License: gpl
Other License: 
Package: Spatter
System name: spatter
Type: non-GNU

Description:
Spatter is a set of command-line tools for the image analysis of cDNA

microarrays. Given a set of image files and the array geometry,

Spatter allows gridding, segmentation, and data extraction to be

performed in a fully-automated manner. Spatter produces results for

each step in the form tab-delimited text files, but can also generate

visual representations of gridding and segmentation results in the

form of image files.

 

Spatter is implemented in C++ and Python. It is written in a modular

style, in order to allow the different steps of the image analysis

system to be modified or extended.

 

The purpose of Spatter is to provide a highly accurate and

fully-automated image analysis tool for cDNA microarrays.

 

Currently, the modules for gridding and segmentation are finished, but

the module for data extraction is not.

 

Spatter is available at:

 

http://www.cdf.toronto.edu/~g1gros/research/spatter/download/spatter-0.4.1.tar.bz2



Other Software Required:
LTI-Lib

http://ltilib.sourceforge.net/

 

Python Imaging Library (PIL)

http://www.pythonware.com/products/pil/

 

Numerical Python

http://numpy.sourceforge.net/



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