Re: rsync: link_stat error

[Ole Tange]

Please follow the guidelines for reporting bugs as mentioned in man parallel:

       Your bug report should always include:

       · The error message you get (if any).

       · The complete output of parallel --version. If you are not running
         the latest released version you should specify why you believe the
         problem is not fixed in that version.

       · A complete example that others can run that shows the problem. This
         should preferably be small and simple. A combination of yes, seq,
         cat, echo, and sleep can reproduce most errors. If your example
         requires large files, see if you can make them by something like seq
         1000000 > file or yes | head -n 10000000 > file. If your example
         requires remote execution, see if you can use localhost.

       · The output of your example. If your problem is not easily reproduced
         by others, the output might help them figure out the problem.

       · Whether you have watched the intro videos
         (http://www.youtube.com/playlist?list=PL284C9FF2488BC6D1), walked
         through the tutorial (man parallel_tutorial), and read the EXAMPLE
         section in the man page (man parallel - search for EXAMPLE:).

       If you suspect the error is dependent on your environment or
       distribution, please see if you can reproduce the error on one of
       these VirtualBox images:
       http://sourceforge.net/projects/virtualboximage/files/

       Specifying the name of your distribution is not enough as you may have
       installed software that is not in the VirtualBox images.

       If you cannot reproduce the error on any of the VirtualBox images
       above, you should assume the debugging will be done through you. That
       will put more burden on you and it is extra important you give any
       information that help.

/Ole

On Thu, Mar 13, 2014 at 1:00 PM, V A Ramesh <varavind121@yahoo.com> wrote:
> Dear all,
>
> I was trying to run parallel both on my local and remote computer using
> following command. If I tried to run the command separately(via SSH) for two
> machines it is working fine.
>
> parallel --eta -S 2/ramesh@10.117.173.73,:  --trc {.}.ss_sa
> 'predict_ss_sa.sh {} {.}.ss_sa' < list_h
>
>
>
> I was getting the following error messages
>
> rsync: link_stat "/home/ramesh/./sp_A0AV02_S12A8_HUMAN.ss_sa" failed: No
> such file or directory (2)
> rsync error: some files/attrs were not transferred (see previous errors)
> (code 23) at main.c(1505) [receiver=3.0.6]
> bash: predict_ss_sa.sh: command not found
> rsync: link_stat "/home/ramesh/./sp_A0AV96_RBM47_HUMAN.ss_sa" failed: No
> such file or directory (2)
> rsync error: some files/attrs were not transferred (see previous errors)
> (code 23) at main.c(1505) [receiver=3.0.6]
> ETA: 11s Left: 8 AVG: 2.00s  ramesh@10.117.173.73:2/2/100%/2.0s bash:
> predict_ss_sa.sh: command not found
> rsync: link_stat "/home/ramesh/./sp_A0AVF1_TTC26_HUMAN.ss_sa" failed: No
> such file or directory (2)
> //
> rsync error: some files/attrs were not transferred (see previous errors)
> (code 23) at main.c(1505) [receiver=3.0.6]
> ETA: 2s Left: 0 AVG: 1.00s  ramesh@10.117.173.73:0/10/100%/1.0s
>
> Any help would be appreciated.
>
>
> --
> Vakkalagadda A Ramesh
> Jr. Research Fellow
> Lab of Computational Biology
> Centre for DNA Fingerprinting and Diagnostics (CDFD)
> Nampally
> Hyderabad-500001
> Lab: 040-24749368
> Mobile: 08686363632
>
>