Re: [myexperiment-hackers] [2364] branches/biocat: trim down workflow_processors model to what' s currently required

[Jiten Bhagat]

Hi Don,

I should have clarified this yesterday - both the 'wsdl' and the
'wsdl_operation' is required from the workflows in order to match a
specific SoapOperation from a SoapService.

However, in the case of this integration work I'm not sure if we'll be
going all the way down to the level of SoapOperations yet? Maybe just
matching the SoapService for now is good enough.

Jits


address@hidden wrote:
>
> Revision
>     2364
> Author
>     dgc
> Date
>     2010-03-31 05:32:55 -0400 (Wed, 31 Mar 2010)
>
>
>       Log Message
>
> trim down workflow_processors model to what's currently required
>
>
>       Modified Paths
>
>     * branches/biocat/config/schema.d/workflows.xml
>       <#branchesbiocatconfigschemadworkflowsxml>
>     * branches/biocat/lib/workflow_processors/taverna2.rb
>       <#branchesbiocatlibworkflow_processorstaverna2rb>
>     * branches/biocat/lib/workflow_processors/taverna_scufl.rb
>       <#branchesbiocatlibworkflow_processorstaverna_scuflrb>
>
>
>       Diff
>
>
>         Modified: branches/biocat/config/schema.d/workflows.xml (2363
>         => 2364)
>
>
> --- branches/biocat/config/schema.d/workflows.xml     2010-03-31 09:31:47 UTC 
> (rev 2363)
> +++ branches/biocat/config/schema.d/workflows.xml     2010-03-31 09:32:55 UTC 
> (rev 2364)
> @@ -5,21 +5,8 @@
>  
>      <column type="integer"    name="workflow_id"/>
>  
> -    <column type="string"     name="dataflow_id"/>
>      <column type="string"     name="name"/>
> -    <column type="string"     name="description"/>
> -    <column type="string"     name="type"/>
> -    <column type="string"     name="model"/>
> -    <column type="string"     name="script"/>
> -    <column type="string"     name="inputs"/>
> -    <column type="string"     name="outputs"/>
>      <column type="string"     name="wsdl"/>
> -    <column type="string"     name="wsdl_operation"/>
> -    <column type="string"     name="endpoint"/>
> -    <column type="string"     name="biomoby_authority_name"/>
> -    <column type="string"     name="biomoby_service_name"/>
> -    <column type="string"     name="biomoby_category"/>
> -    <column type="string"     name="value"/>
>  
>      <belongs-to target="workflows"/>
>  
>
>
>         Modified: branches/biocat/lib/workflow_processors/taverna2.rb
>         (2363 => 2364)
>
>
> --- branches/biocat/lib/workflow_processors/taverna2.rb       2010-03-31 
> 09:31:47 UTC (rev 2363)
> +++ branches/biocat/lib/workflow_processors/taverna2.rb       2010-03-31 
> 09:32:55 UTC (rev 2364)
> @@ -365,24 +365,8 @@
>      def extract_metadata(workflow_id)
>  
>        @t2flow_model.all_processors.each do |processor|
> -
> -      WorkflowProcessor.create(
> -
> -          :workflow_id            => workflow_id,
> -          :name                   => processor.name,
> -          :description            => processor.description,
> -          :type                   => processor.type,
> -          :dataflow_id            => processor.dataflow_id,
> -          :script                 => processor.script,
> -          :inputs                 => processor.inputs,
> -          :outputs                => processor.outputs,
> -          :wsdl                   => processor.wsdl,
> -          :wsdl_operation         => processor.wsdl_operation,
> -          :endpoint               => processor.endpoint,
> -          :biomoby_authority_name => processor.biomoby_authority_name,
> -          :biomoby_service_name   => processor.biomoby_service_name,
> -          :biomoby_category       => processor.biomoby_category,
> -          :value                  => processor.value)
> +        WorkflowProcessor.create(:workflow_id => workflow_id,
> +            :name => processor.name, :wsdl => processor.wsdl)
>        end
>      end
>  
>
>
>         Modified:
>         branches/biocat/lib/workflow_processors/taverna_scufl.rb (2363
>         => 2364)
>
>
> --- branches/biocat/lib/workflow_processors/taverna_scufl.rb  2010-03-31 
> 09:31:47 UTC (rev 2363)
> +++ branches/biocat/lib/workflow_processors/taverna_scufl.rb  2010-03-31 
> 09:32:55 UTC (rev 2364)
> @@ -284,25 +284,8 @@
>      def extract_metadata(workflow_id)
>  
>        @scufl_model.all_processors.each do |processor|
> -
> -      WorkflowProcessor.create(
> -
> -          :workflow_id            => workflow_id,
> -
> -          :name                   => processor.name,
> -          :description            => processor.description,
> -          :type                   => processor.type,
> -          :model                  => processor.model,
> -          :script                 => processor.script,
> -          :inputs                 => processor.inputs,
> -          :outputs                => processor.outputs,
> -          :wsdl                   => processor.wsdl,
> -          :wsdl_operation         => processor.wsdl_operation,
> -          :endpoint               => processor.endpoint,
> -          :biomoby_authority_name => processor.biomoby_authority_name,
> -          :biomoby_service_name   => processor.biomoby_service_name,
> -          :biomoby_category       => processor.biomoby_category,
> -          :value                  => processor.value)
> +        WorkflowProcessor.create(:workflow_id => workflow_id,
> +            :name => processor.name, :wsdl => processor.wsdl)
>        end
>      end
>  
> ------------------------------------------------------------------------
>
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