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problems installing openmpi_ext


From: Francis Poulin
Subject: problems installing openmpi_ext
Date: Mon, 12 Aug 2013 12:26:11 +0000

Hello,

Sorry for the quick send before.  I have looked into the problem and see all 
the dependencies are installed and even loaded (probably not necessary).

octave:20> pkg list
Package Name  | Version | Installation directory
--------------+---------+-----------------------
         bim *|   1.1.2 | /Users/fpoulin/octave/bim-1.1.2
         fpl *|   1.3.4 | /Users/fpoulin/octave/fpl-1.3.4
         msh *|   1.0.8 | /Users/fpoulin/octave/msh-1.0.8
    parallel *|   2.0.5 | /Users/fpoulin/octave/parallel-2.0.5
     splines *|   1.2.2 | /Users/fpoulin/octave/splines-1.2.2

Now that I try and install openmpi_ext I get the following error

octave:22> pkg install openmpi_ext-1.1.0.tar.gz
MPI_Iprobe.cc: In function 'Octave_map put_MPI_Stat(const MPI_Status&)':
MPI_Iprobe.cc:38:14: error: 'const struct MPI_Status' has no member named 
'_count'
make: *** [MPI_Iprobe.oct] Error 1
'make' returned the following error: /opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Init.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Initialized.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Comm_rank.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Comm_size.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Finalize.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Finalized.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Send.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Recv.cc
/opt/local/bin/mkoctfile-3.6.4 
-I/sw/include/openmpi/opal/mca/hwloc/hwloc132/hwloc/include -I/sw/include 
-I/sw/include/openmpi -L/sw/lib/openmpi -lmpi_cxx -lmpi -lm MPI_Iprobe.cc
error: called from 'pkg>configure_make' in file 
/opt/local/share/octave/3.6.4/m/pkg/pkg.m near line 1385, column 9
error: called from:
error:   /opt/local/share/octave/3.6.4/m/pkg/pkg.m at line 827, column 5
error:   /opt/local/share/octave/3.6.4/m/pkg/pkg.m at line 383, column 9

I have two versions of octave installed, one through macports and the other 
through fink. Maybe there is a conflict somewhere?  If there is an easier way 
to install it in my mac that would be great to know. 

Cheers, Francis

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