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[PATCH 1/3] gnu: Add r-chipseq.
From: |
Ricardo Wurmus |
Subject: |
[PATCH 1/3] gnu: Add r-chipseq. |
Date: |
Wed, 4 Jan 2017 16:25:19 +0100 |
* gnu/packages/bioinformatics.scm (r-chipseq): New variable.
---
gnu/packages/bioinformatics.scm | 27 ++++++++++++++++++++++++++-
1 file changed, 26 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6b363afe0..9c01c2436 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2014, 2015, 2016 Ricardo Wurmus <address@hidden>
+;;; Copyright © 2014, 2015, 2016, 2017 Ricardo Wurmus <address@hidden>
;;; Copyright © 2015, 2016 Ben Woodcroft <address@hidden>
;;; Copyright © 2015, 2016 Pjotr Prins <address@hidden>
;;; Copyright © 2015 Andreas Enge <address@hidden>
@@ -7869,3 +7869,28 @@ replacement for strverscmp.")
samples into a single report. It contains modules for a large number of
common bioinformatics tools.")
(license license:gpl3)))
+
+(define-public r-chipseq
+ (package
+ (name "r-chipseq")
+ (version "1.24.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "chipseq" version))
+ (sha256
+ (base32
+ "115ayp82rs99iaswrx45skw1i5iacgwzz5k8rzijbp5qic0554n0"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biocgenerics" ,r-biocgenerics)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-iranges" ,r-iranges)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-shortread" ,r-shortread)))
+ (home-page "http://bioconductor.org/packages/chipseq")
+ (synopsis "Package for analyzing ChIPseq data")
+ (description
+ "This package provides tools for processing short read data from ChIPseq
+experiments.")
+ (license license:artistic2.0)))
--
2.11.0
- [PATCH 1/3] gnu: Add r-chipseq.,
Ricardo Wurmus <=