guix-devel
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[PATCH] gnu: Add r-limma.


From: Roel Janssen
Subject: [PATCH] gnu: Add r-limma.
Date: Tue, 03 May 2016 09:35:04 +0200
User-agent: mu4e 0.9.17; emacs 25.1.50.3

Dear Guix,

I have two R packages I would like to add.  The other package 'r-edger'
depends on this one.  This is the first time I'm attempting an inline
patch, so I hope this works out well.

Kind regards,
Roel Janssen

>From 565fa10f9896e1143419b2a2c6496b91a135a930 Mon Sep 17 00:00:00 2001
From: Roel Janssen <address@hidden>
Date: Tue, 3 May 2016 09:30:14 +0200
Subject: [PATCH] gnu: Add r-limma.

* gnu/packages/bioinformatics.scm (r-limma): New variable.
---
 gnu/packages/bioinformatics.scm | 18 ++++++++++++++++++
 1 file changed, 18 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 079fd46..3dfb55e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4171,6 +4171,24 @@ names in their natural, rather than lexicographic, 
order.")
 coding changes and predict coding outcomes.")
     (license license:artistic2.0)))
 
+(define-public r-limma
+  (package
+    (name "r-limma")
+    (version "3.26.9")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "limma" version))
+              (sha256
+               (base32
+                "0mj72zsj1awjf3i2y9x8m7ih4sx9qrs1rlrck9l7mn5afxqsfrsm"))))
+    (properties `((upstream-name . "limma")))
+    (build-system r-build-system)
+    (home-page "http://bioinf.wehi.edu.au/limma";)
+    (synopsis "This package provides linear models for microarray data")
+    (description "This package provides linear models and differential
+expression for microarray data analysis.")
+    (license license:gpl2+)))
+
 (define-public r-xvector
   (package
     (name "r-xvector")
-- 
2.7.4



reply via email to

[Prev in Thread] Current Thread [Next in Thread]