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Re: [PATCH] gnu: Add TopHat.
From: |
Ricardo Wurmus |
Subject: |
Re: [PATCH] gnu: Add TopHat. |
Date: |
Sat, 23 Jan 2016 08:50:10 +0100 |
User-agent: |
mu4e 0.9.13; emacs 24.5.1 |
Ludovic Courtès <address@hidden> writes:
> Ricardo Wurmus <address@hidden> skribis:
>
>> + (synopsis "Spliced read mapper for RNA-Seq")
>> + (description
>> + "TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns
>
> It would be nice to contextualize a bit, for instance by adding a word
> after “RNA-Seq”, like:
>
> … for RNA-Seq bioinformatics foobars
>
> or:
>
> … for the RNA-Seq bioinformatics thingie
>
> Something like that. :-)
I changed it to “for RNA-Seq data” in the synopsis and “for nucleotide
sequence reads produced by the RNA-Seq method” in the description.
That’s probably a little clunky for bioinformaticians but I hope it’s a
little less dense for everyone else.
>
>> + ;; TopHat is released under the Boost Software License, Version 1.0
>> + ;; See
>> https://github.com/infphilo/tophat/issues/11#issuecomment-121589893
>> + (license (license:x11-style "http://www.boost.org/LICENSE_1_0.txt"
>> + "Some components have other similar
>> licences."))))
>
> You can use ‘license:boost1.0’ here.
Done. Thanks for the suggestions!
~~ Ricardo