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Update mafft to 7.245.

From: Ben Woodcroft
Subject: Update mafft to 7.245.
Date: Tue, 10 Nov 2015 22:18:10 +1000
User-agent: Mozilla/5.0 (X11; Linux x86_64; rv:38.0) Gecko/20100101 Thunderbird/38.3.0
Also had to fix the inputs. Hard not to notice these things in the environment container - worked well thanks.

Attachment: 0001-gnu-mafft-Update-to-7.245.patch
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