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01/07: Merge branch 'master' into core-updates
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From: |
guix-commits |
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Subject: |
01/07: Merge branch 'master' into core-updates |
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Date: |
Wed, 12 Dec 2018 14:12:53 -0500 (EST) |
mbakke pushed a commit to branch core-updates
in repository guix.
commit b03e4fd5269897448124a7b61a737802b2c638ee
Merge: da3c6a7 99aad42
Author: Marius Bakke <address@hidden>
Date: Tue Dec 11 22:18:05 2018 +0100
Merge branch 'master' into core-updates
.gitignore | 2 +-
Makefile.am | 105 +-
NEWS | 96 +-
README | 4 +-
build-aux/check-available-binaries.scm | 4 +-
build-aux/check-final-inputs-self-contained.scm | 2 +-
build-aux/hydra/gnu-system.scm | 4 +-
build-aux/update-NEWS.scm | 62 +-
build-aux/update-guix-package.scm | 5 +-
config-daemon.ac | 14 +-
configure.ac | 6 +-
doc/contributing.de.texi | 534 +
doc/contributing.fr.texi | 37 +-
doc/contributing.texi | 5 +-
doc/{guix.texi => guix.de.texi} | 17272 ++++++-------
doc/guix.fr.texi | 5664 ++--
doc/guix.texi | 633 +-
doc/local.mk | 5 +-
etc/completion/bash/guix | 4 +-
etc/guix-daemon.conf.in | 2 +-
etc/guix-daemon.service.in | 4 +-
etc/guix-install.sh | 23 +-
etc/guix-publish.conf.in | 2 +-
etc/guix-publish.service.in | 4 +-
.../substitutes/berlin.guixsd.org.pub | 0
etc/substitutes/ci.guix.info.pub | 1 +
.../substitutes/hydra.gnu.org.pub | 0
gnu/artwork.scm | 4 +-
gnu/bootloader/extlinux.scm | 6 +-
gnu/bootloader/grub.scm | 104 +-
gnu/bootloader/u-boot.scm | 11 +-
gnu/build/activation.scm | 17 +-
gnu/build/install.scm | 97 +-
gnu/build/linux-initrd.scm | 30 +-
gnu/build/vm.scm | 24 +-
gnu/local.mk | 71 +-
gnu/packages/admin.scm | 252 +-
gnu/packages/algebra.scm | 167 +-
gnu/packages/android.scm | 13 +-
gnu/packages/antivirus.scm | 156 +
gnu/packages/audio.scm | 444 +-
.../linux-libre/{4.18-arm.conf => 4.19-arm.conf} | 1141 +-
.../{4.18-arm64.conf => 4.19-arm64.conf} | 3562 +--
.../linux-libre/{4.18-i686.conf => 4.19-i686.conf} | 15836 ++++++------
.../{4.18-x86_64.conf => 4.19-x86_64.conf} | 2706 +-
gnu/packages/backup.scm | 24 +-
gnu/packages/base.scm | 139 +-
gnu/packages/benchmark.scm | 6 +-
gnu/packages/bioconductor.scm | 255 +-
gnu/packages/bioinformatics.scm | 2227 +-
gnu/packages/bittorrent.scm | 86 +-
gnu/packages/boost.scm | 14 +-
gnu/packages/bootloaders.scm | 33 +-
gnu/packages/build-tools.scm | 95 +-
gnu/packages/c.scm | 54 +-
gnu/packages/calcurse.scm | 4 +-
gnu/packages/calendar.scm | 4 +-
gnu/packages/ccache.scm | 6 +-
gnu/packages/cdrom.scm | 35 +-
gnu/packages/check.scm | 90 +-
gnu/packages/ci.scm | 6 +-
gnu/packages/clojure.scm | 293 +
gnu/packages/code.scm | 26 +-
gnu/packages/compression.scm | 142 +-
gnu/packages/cran.scm | 1709 +-
gnu/packages/cross-base.scm | 18 +-
gnu/packages/crypto.scm | 57 +-
gnu/packages/cups.scm | 14 +-
gnu/packages/curl.scm | 14 +
gnu/packages/databases.scm | 216 +-
gnu/packages/datastructures.scm | 24 +
gnu/packages/dav.scm | 4 +-
gnu/packages/debian.scm | 60 +-
gnu/packages/dictionaries.scm | 109 +-
gnu/packages/django.scm | 120 +-
gnu/packages/dns.scm | 66 +-
gnu/packages/easyrpg.scm | 121 +
gnu/packages/ebook.scm | 4 +-
gnu/packages/education.scm | 8 +-
gnu/packages/electronics.scm | 48 +-
gnu/packages/elf.scm | 4 +-
gnu/packages/emacs.scm | 569 +-
gnu/packages/embedded.scm | 13 +-
gnu/packages/emulators.scm | 15 +-
gnu/packages/engineering.scm | 11 +-
gnu/packages/enlightenment.scm | 22 +-
gnu/packages/file-systems.scm | 55 +-
gnu/packages/finance.scm | 41 +-
gnu/packages/firmware.scm | 17 +-
gnu/packages/fltk.scm | 9 +-
gnu/packages/fonts.scm | 27 +-
gnu/packages/fpga.scm | 13 +-
gnu/packages/freedesktop.scm | 141 +-
gnu/packages/ftp.scm | 10 +-
gnu/packages/game-development.scm | 26 +-
gnu/packages/games.scm | 211 +-
gnu/packages/gcc.scm | 29 +-
gnu/packages/gd.scm | 2 +-
gnu/packages/geo.scm | 4 +-
gnu/packages/gl.scm | 34 +-
gnu/packages/glib.scm | 13 +-
gnu/packages/gnome.scm | 98 +-
gnu/packages/gnunet.scm | 4 +-
gnu/packages/gnupg.scm | 34 +-
gnu/packages/gnustep.scm | 19 +-
gnu/packages/gnuzilla.scm | 49 +-
gnu/packages/golang.scm | 1086 +-
gnu/packages/gps.scm | 4 +-
gnu/packages/graph.scm | 4 +-
gnu/packages/graphics.scm | 5 +-
gnu/packages/gtk.scm | 36 +-
gnu/packages/guile.scm | 135 +-
gnu/packages/hardware.scm | 44 +
gnu/packages/hurd.scm | 136 +-
gnu/packages/ibus.scm | 683 +-
gnu/packages/idutils.scm | 16 +-
gnu/packages/image-viewers.scm | 28 +-
gnu/packages/image.scm | 170 +-
gnu/packages/imagemagick.scm | 5 +-
gnu/packages/ipfs.scm | 239 +
gnu/packages/irc.scm | 29 +-
gnu/packages/java.scm | 366 +-
gnu/packages/javascript.scm | 16 +-
gnu/packages/julia.scm | 4 +-
gnu/packages/kde.scm | 40 +
gnu/packages/kodi.scm | 74 +-
gnu/packages/libffi.scm | 3 +-
gnu/packages/libreoffice.scm | 65 +-
gnu/packages/libusb.scm | 4 +-
gnu/packages/linux.scm | 146 +-
gnu/packages/lirc.scm | 3 +-
gnu/packages/lisp.scm | 425 +-
gnu/packages/llvm.scm | 104 +-
gnu/packages/lua.scm | 3 +
gnu/packages/lxde.scm | 9 +-
gnu/packages/lxqt.scm | 1198 +-
gnu/packages/machine-learning.scm | 53 +-
gnu/packages/mail.scm | 139 +-
gnu/packages/man.scm | 14 +-
gnu/packages/markup.scm | 3 +-
gnu/packages/maths.scm | 251 +-
gnu/packages/maven.scm | 57 +-
gnu/packages/messaging.scm | 356 +-
gnu/packages/monitoring.scm | 26 +
gnu/packages/mono.scm | 23 +-
gnu/packages/mp3.scm | 4 +-
gnu/packages/mpd.scm | 18 +-
gnu/packages/mpi.scm | 42 +
gnu/packages/mtools.scm | 6 +-
gnu/packages/multiprecision.scm | 66 +
gnu/packages/music.scm | 303 +-
gnu/packages/nano.scm | 4 +-
gnu/packages/networking.scm | 52 +-
gnu/packages/nfs.scm | 8 +
gnu/packages/ocaml.scm | 2368 +-
gnu/packages/package-management.scm | 21 +-
gnu/packages/parallel.scm | 4 +-
gnu/packages/password-utils.scm | 26 +-
gnu/packages/patches/aegisub-boost68.patch | 35 +
gnu/packages/patches/beets-python-3.7-fix.patch | 57 +
gnu/packages/patches/blender-newer-ffmpeg.patch | 80 +
.../patches/borg-respect-storage-quota.patch | 32 -
.../patches/casync-renameat2-declaration.patch | 27 +
gnu/packages/patches/ceph-detect-rocksdb.patch | 24 +
gnu/packages/patches/ceph-rocksdb-compat.patch | 63 -
.../patches/ceph-skip-unittest_blockdev.patch | 20 +-
.../patches/ceph-volume-respect-PATH.patch | 22 +
gnu/packages/patches/clamav-config-llvm-libs.patch | 14 +
.../patches/clamav-system-tomsfastmath.patch | 102 +
.../patches/crossmap-allow-system-pysam.patch | 121 -
.../patches/delly-use-system-libraries.patch | 56 -
gnu/packages/patches/elogind-glibc-2.27.patch | 22 -
gnu/packages/patches/emacs-pdf-tools-poppler.patch | 41 +
.../patches/emacs-realgud-fix-configure-ac.patch | 27 +
gnu/packages/patches/gcc-libsanitizer-fix.patch | 113 -
gnu/packages/patches/gemma-intel-compat.patch | 44 -
.../patches/handbrake-pkg-config-path.patch | 24 -
.../patches/hplip-remove-imageprocessor.patch | 232 +
gnu/packages/patches/icecat-CVE-2018-12383.patch | 103 -
gnu/packages/patches/jq-CVE-2015-8863.patch | 45 -
gnu/packages/patches/libgit2-oom-test.patch | 62 +
gnu/packages/patches/liblxqt-include.patch | 14 -
.../libopenshot-tests-with-system-libs.patch | 95 +
gnu/packages/patches/lirc-reproducible-build.patch | 72 +
.../patches/mailutils-uninitialized-memory.patch | 87 -
.../meandmyshadow-define-paths-earlier.patch | 50 +
gnu/packages/patches/mono-mdoc-timestamping.patch | 15 +
gnu/packages/patches/myrepos-CVE-2018-7032.patch | 69 -
...ml-bisect-fix-camlp4-in-another-directory.patch | 246 +-
.../patches/openjdk-10-idlj-reproducibility.patch | 36 +
gnu/packages/patches/patchutils-test-perms.patch | 14 +
.../patches/patchutils-xfail-gendiff-tests.patch | 26 -
gnu/packages/patches/pinentry-efl.patch | 798 +
gnu/packages/patches/podofo-cmake-3.12.patch | 19 +
gnu/packages/patches/polkit-CVE-2018-19788.patch | 197 +
gnu/packages/patches/poppler-CVE-2018-19149.patch | 80 +
.../patches/python-cffi-x87-stack-clean.patch | 29 +
.../python-networkx2-reproducible-build.patch | 29 -
.../patches/python-paste-remove-website-test.patch | 21 -
...hon-scikit-learn-fix-test-non-determinism.patch | 25 -
gnu/packages/patches/qemu-CVE-2018-16847.patch | 158 +
gnu/packages/patches/qemu-CVE-2018-16867.patch | 49 +
gnu/packages/patches/qt-5-renameat2.patch | 35 +
gnu/packages/patches/qtbase-glibc-compat.patch | 50 -
...ram.patch => quilt-getopt-nondigit-param.patch} | 0
...r.patch => quilt-getopt-second-separator.patch} | 0
.../randomjungle-disable-static-build.patch | 14 +
.../rust-1.25-accept-more-detailed-gdb-lines.patch | 17 +
.../patches/rust-reproducible-builds.patch | 25 +
gnu/packages/patches/scribus-poppler.patch | 72 +
.../patches/teeworlds-use-latest-wavpack.patch | 72 +-
.../patches/telegram-purple-adjust-test.patch | 14 +
gnu/packages/patches/tomsfastmath-constness.patch | 76 +
.../patches/tophat-build-with-later-seqan.patch | 24 -
.../patches/u-boot-pinebook-a64-update-dts.patch | 1485 ++
gnu/packages/patches/u-boot-pinebook-dts.patch | 388 +
.../patches/u-boot-pinebook-mmc-calibration.patch | 98 +
.../patches/u-boot-pinebook-r_i2c-controller.patch | 70 +
.../patches/u-boot-pinebook-syscon-node.patch | 38 +
.../patches/u-boot-pinebook-video-bridge.patch | 50 +
.../patches/vsearch-unbundle-cityhash.patch | 6 +-
...xmaxima-do-not-use-old-gnuplot-parameters.patch | 26 -
gnu/packages/patches/x265-arm-flags.patch | 36 +
gnu/packages/patches/xapian-revert-5489fb2f8.patch | 23 -
.../zathura-pdf-mupdf-link-to-jpeg-libraries.patch | 55 -
gnu/packages/patchutils.scm | 16 +-
gnu/packages/pdf.scm | 139 +-
gnu/packages/perl-check.scm | 2 +-
gnu/packages/perl.scm | 15 +-
gnu/packages/phabricator.scm | 124 +
gnu/packages/photo.scm | 19 +-
gnu/packages/php.scm | 9 +-
gnu/packages/polkit.scm | 1 +
gnu/packages/pretty-print.scm | 4 +-
gnu/packages/python-crypto.scm | 55 +-
gnu/packages/python-web.scm | 126 +-
gnu/packages/python.scm | 874 +-
gnu/packages/qt.scm | 362 +-
gnu/packages/rdf.scm | 20 +-
gnu/packages/regex.scm | 11 +-
gnu/packages/ruby.scm | 20 +-
gnu/packages/rust.scm | 240 +-
gnu/packages/samba.scm | 40 +-
gnu/packages/scheme.scm | 233 +-
gnu/packages/scribus.scm | 4 +-
gnu/packages/sdl.scm | 10 +-
gnu/packages/search.scm | 7 +-
gnu/packages/security-token.scm | 38 +-
gnu/packages/serialization.scm | 46 +-
gnu/packages/shells.scm | 33 +-
gnu/packages/shellutils.scm | 19 +-
gnu/packages/simulation.scm | 502 +-
gnu/packages/slang.scm | 14 +-
gnu/packages/sml.scm | 19 +-
gnu/packages/spice.scm | 6 +-
gnu/packages/ssh.scm | 12 +-
gnu/packages/statistics.scm | 236 +-
gnu/packages/storage.scm | 45 +-
gnu/packages/sync.scm | 51 +-
gnu/packages/syncthing.scm | 243 +-
gnu/packages/telephony.scm | 21 +-
gnu/packages/terminals.scm | 229 +-
gnu/packages/terraform.scm | 11 +-
gnu/packages/tex.scm | 191 +-
gnu/packages/textutils.scm | 54 +-
gnu/packages/tls.scm | 10 +-
gnu/packages/tor.scm | 24 +-
gnu/packages/tv.scm | 10 +
gnu/packages/version-control.scm | 247 +-
gnu/packages/video.scm | 515 +-
gnu/packages/vim.scm | 29 +-
gnu/packages/virtualization.scm | 58 +
gnu/packages/vpn.scm | 24 +-
gnu/packages/web-browsers.scm | 148 +-
gnu/packages/web.scm | 113 +-
gnu/packages/webkit.scm | 50 +-
gnu/packages/wine.scm | 10 +-
gnu/packages/wm.scm | 4 +-
gnu/packages/wxwidgets.scm | 15 +-
gnu/packages/xdisorg.scm | 120 +-
gnu/packages/xiph.scm | 80 +-
gnu/packages/xml.scm | 106 +-
gnu/packages/xorg.scm | 80 +-
gnu/services/base.scm | 119 +-
gnu/services/cuirass.scm | 6 +-
gnu/services/desktop.scm | 8 +-
gnu/services/dns.scm | 7 +-
gnu/services/games.scm | 3 +-
gnu/services/mail.scm | 51 +-
gnu/services/mcron.scm | 2 +-
gnu/services/ssh.scm | 10 +-
gnu/services/web.scm | 5 +
gnu/system.scm | 165 +-
gnu/system/examples/bare-bones.tmpl | 4 +-
gnu/system/examples/desktop.tmpl | 2 +-
gnu/system/install.scm | 8 +-
gnu/system/linux-initrd.scm | 16 +-
gnu/system/vm.scm | 212 +-
gnu/tests/base.scm | 25 +-
gnu/tests/desktop.scm | 2 +-
gnu/tests/install.scm | 10 +-
guix/build-system/clojure.scm | 195 +
guix/build-system/ocaml.scm | 24 +-
guix/build-system/r.scm | 2 +-
guix/build/clojure-build-system.scm | 110 +
guix/build/clojure-utils.scm | 265 +
guix/build/dub-build-system.scm | 33 +-
guix/build/git.scm | 2 +
guix/build/go-build-system.scm | 3 +
guix/build/haskell-build-system.scm | 2 +-
guix/build/hg.scm | 7 +-
guix/build/ocaml-build-system.scm | 45 +-
guix/build/store-copy.scm | 28 +
guix/channels.scm | 134 +-
guix/ci.scm | 74 +-
guix/derivations.scm | 30 +-
guix/docker.scm | 25 +-
guix/download.scm | 45 +-
guix/gexp.scm | 37 +-
guix/git-download.scm | 70 +-
guix/git.scm | 68 +-
guix/gnu-maintenance.scm | 115 +-
guix/grafts.scm | 20 +-
guix/import/cran.scm | 4 +-
guix/import/hackage.scm | 21 +-
guix/inferior.scm | 70 +-
guix/nar.scm | 13 +-
guix/profiles.scm | 2 +-
guix/progress.scm | 28 +-
guix/scripts.scm | 38 +-
guix/scripts/build.scm | 90 +-
guix/scripts/describe.scm | 123 +-
guix/scripts/hash.scm | 5 +-
guix/scripts/lint.scm | 56 +-
guix/scripts/pack.scm | 460 +-
guix/scripts/package.scm | 14 +-
guix/scripts/processes.scm | 223 +
guix/scripts/pull.scm | 17 +-
guix/scripts/refresh.scm | 23 +-
guix/scripts/repl.scm | 10 +-
guix/scripts/size.scm | 2 +-
guix/scripts/substitute.scm | 2 +-
guix/scripts/system.scm | 134 +-
guix/self.scm | 58 +-
guix/ssh.scm | 8 +-
guix/status.scm | 17 +-
guix/store.scm | 70 +-
guix/store/database.scm | 8 +-
guix/store/deduplication.scm | 12 +-
guix/swh.scm | 560 +
guix/tests.scm | 34 +
guix/ui.scm | 26 +-
m4/guix.m4 | 2 +-
nix/libstore/local-store.cc | 17 +-
nix/local.mk | 7 +-
nix/nix-daemon/guix-daemon.cc | 12 -
nix/nix-daemon/nix-daemon.cc | 6 +
.../{guix-authenticate.in => authenticate.in} | 0
po/doc/{guix-manual.fr.po => guix-manual.de.po} | 25803 +++++++++----------
po/doc/guix-manual.fr.po | 20071 +++++++++------
po/doc/local.mk | 11 +-
po/guix/POTFILES.in | 2 +
po/guix/de.po | 20 +-
po/guix/fr.po | 1432 +-
po/packages/fr.po | 7687 +++---
tests/challenge.scm | 8 -
tests/channels.scm | 139 +
tests/debug-link.scm | 8 -
tests/derivations.scm | 10 +
tests/gexp.scm | 31 +-
tests/grafts.scm | 13 +-
tests/guix-build-branch.sh | 56 +
tests/guix-pack-localstatedir.sh | 69 +
tests/guix-pack-relocatable.sh | 61 +
tests/guix-pack.sh | 28 +-
tests/guix-package.sh | 4 +
tests/inferior.scm | 9 +
tests/lint.scm | 4 +-
tests/nar.scm | 47 +-
tests/pack.scm | 158 +-
tests/processes.scm | 86 +
tests/profiles.scm | 11 -
tests/size.scm | 8 -
383 files changed, 80773 insertions(+), 56737 deletions(-)
diff --cc gnu/local.mk
index 773d55f,4f2437b..0c324cd
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@@ -594,12 -601,12 +601,13 @@@ dist_patch_DATA =
%D%/packages/patches/bash-completion-directories.patch \
%D%/packages/patches/bastet-change-source-of-unordered_set.patch \
%D%/packages/patches/bazaar-CVE-2017-14176.patch \
+ %D%/packages/patches/beets-python-3.7-fix.patch \
%D%/packages/patches/beignet-correct-file-names.patch \
+ %D%/packages/patches/binutils-boot-2.20.1a.patch \
%D%/packages/patches/binutils-loongson-workaround.patch \
%D%/packages/patches/blast+-fix-makefile.patch \
+ %D%/packages/patches/blender-newer-ffmpeg.patch \
%D%/packages/patches/boost-fix-icu-build.patch \
- %D%/packages/patches/borg-respect-storage-quota.patch \
%D%/packages/patches/byobu-writable-status.patch \
%D%/packages/patches/cairo-CVE-2016-9082.patch \
%D%/packages/patches/cairo-setjmp-wrapper.patch \
@@@ -886,7 -888,9 +894,8 @@@
%D%/packages/patches/libevent-2.1-skip-failing-test.patch \
%D%/packages/patches/libexif-CVE-2016-6328.patch \
%D%/packages/patches/libexif-CVE-2017-7544.patch \
- %D%/packages/patches/libgcrypt-make-yat2m-reproducible.patch \
%D%/packages/patches/libgit2-mtime-0.patch \
+ %D%/packages/patches/libgit2-oom-test.patch \
%D%/packages/patches/libgdata-fix-tests.patch \
%D%/packages/patches/libgdata-glib-duplicate-tests.patch \
%D%/packages/patches/libgnome-encoding.patch \
@@@ -961,8 -965,8 +970,9 @@@
%D%/packages/patches/mcrypt-CVE-2012-4409.patch \
%D%/packages/patches/mcrypt-CVE-2012-4426.patch \
%D%/packages/patches/mcrypt-CVE-2012-4527.patch \
+ %D%/packages/patches/meandmyshadow-define-paths-earlier.patch \
%D%/packages/patches/mesa-skip-disk-cache-test.patch \
+ %D%/packages/patches/mescc-tools-boot.patch \
%D%/packages/patches/meson-for-build-rpath.patch \
%D%/packages/patches/metabat-fix-compilation.patch \
%D%/packages/patches/mhash-keygen-test-segfault.patch \
- branch core-updates updated (da3c6a7 -> 5b2da2a), guix-commits, 2018/12/12
- 02/07: gnu: libgc: Update to 7.6.8., guix-commits, 2018/12/12
- 05/07: gnu: bison: Update to 3.2.2., guix-commits, 2018/12/12
- 04/07: gnu: perl: Update to 5.28.1., guix-commits, 2018/12/12
- 06/07: gnu: libxml2: Don't reference libxml2.a in the default output., guix-commits, 2018/12/12
- 07/07: gnu: xz: Move liblzma.a to separate output., guix-commits, 2018/12/12
- 03/07: gnu: libatomic-ops: Update to 7.6.8., guix-commits, 2018/12/12
- 01/07: Merge branch 'master' into core-updates,
guix-commits <=