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05/53: gnu: Add r-blockfest.
From: |
Ricardo Wurmus |
Subject: |
05/53: gnu: Add r-blockfest. |
Date: |
Thu, 16 Aug 2018 11:04:56 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 65e748141d60b282c75113d6bce96bc3d3ef563d
Author: Ricardo Wurmus <address@hidden>
Date: Tue Jul 24 14:18:45 2018 +0200
gnu: Add r-blockfest.
* gnu/packages/cran.scm (r-blockfest): New variable.
---
gnu/packages/cran.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 98ef3ba..4dd2ec4 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -4742,3 +4742,27 @@ splice site positions.")
"BASIX provides some efficient C/C++ implementations of native R
procedures to speed up calculations in R.")
(license license:gpl2)))
+
+(define-public r-blockfest
+ (package
+ (name "r-blockfest")
+ (version "1.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "BlockFeST" version))
+ (sha256
+ (base32
+ "0hj7a5as7nxbgjac7lbj6qfwffx3g8x8phpf9a55f1c9cdzi73a5"))))
+ (properties `((upstream-name . "BlockFeST")))
+ (build-system r-build-system)
+ (propagated-inputs `(("r-basix" ,r-basix)))
+ (home-page "https://cran.r-project.org/web/packages/BlockFeST/")
+ (synopsis "Bayesian calculation of region-specific fixation index")
+ (description
+ "This package provides an R implementation of an extension of the
+BayeScan software for codominant markers, adding the option to group
+individual SNPs into pre-defined blocks. A typical application of this new
+approach is the identification of genomic regions, genes, or gene sets
+containing one or more SNPs that evolved under directional selection.")
+ (license license:gpl2)))
- branch master updated (9c33229 -> b64ce4b), Ricardo Wurmus, 2018/08/16
- 04/53: gnu: Add r-basix., Ricardo Wurmus, 2018/08/16
- 06/53: gnu: Add python-argparse-manpage., Ricardo Wurmus, 2018/08/16
- 03/53: gnu: Add r-refgenome., Ricardo Wurmus, 2018/08/16
- 02/53: gnu: Add r-doby., Ricardo Wurmus, 2018/08/16
- 05/53: gnu: Add r-blockfest.,
Ricardo Wurmus <=
- 01/53: gnu: Add nudoku., Ricardo Wurmus, 2018/08/16
- 09/53: gnu: Add r-hash., Ricardo Wurmus, 2018/08/16
- 07/53: gnu: Add python-ldap., Ricardo Wurmus, 2018/08/16
- 08/53: gnu: Add 389-ds-base., Ricardo Wurmus, 2018/08/16
- 21/53: gnu: Add ghc-call-stack-boot., Ricardo Wurmus, 2018/08/16
- 14/53: gnu: ghc-hspec-expectations: Update to 0.8.2., Ricardo Wurmus, 2018/08/16
- 10/53: gnu: hspec-discover: Update to 2.5.5., Ricardo Wurmus, 2018/08/16
- 36/53: gnu: ghc-blaze-html: Allow build with newer HUnit., Ricardo Wurmus, 2018/08/16
- 30/53: gnu: ghc-conduit-extra: Update to 1.3.0., Ricardo Wurmus, 2018/08/16
- 13/53: gnu: ghc-hspec-contrib: Update to 0.5.0., Ricardo Wurmus, 2018/08/16