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01/26: gnu: Add r-aroma-light.


From: Ricardo Wurmus
Subject: 01/26: gnu: Add r-aroma-light.
Date: Mon, 22 May 2017 13:03:14 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit d4b83651d1331ebe5327d0d448567f3084bdd8b5
Author: Ricardo Wurmus <address@hidden>
Date:   Wed May 17 16:36:35 2017 +0200

    gnu: Add r-aroma-light.
    
    * gnu/packages/bioinformatics.scm (r-aroma-light): New variable.
---
 gnu/packages/bioinformatics.scm | 27 +++++++++++++++++++++++++++
 1 file changed, 27 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9b4afbf..a372b16 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8994,6 +8994,33 @@ algorithms; density clustering, hierarchical clustering, 
k-means, and the
 discovery of differentially expressed genes and markers.")
       (license license:gpl3))))
 
+(define-public r-aroma-light
+  (package
+    (name "r-aroma-light")
+    (version "3.6.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "aroma.light" version))
+       (sha256
+        (base32
+         "10snykmmx36qaymyf5s1n1km8hsscyzpykcpf0mzsrcv8ml9rp8a"))))
+    (properties `((upstream-name . "aroma.light")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-matrixstats" ,r-matrixstats)
+       ("r-r-methodss3" ,r-r-methodss3)
+       ("r-r-oo" ,r-r-oo)
+       ("r-r-utils" ,r-r-utils)))
+    (home-page "https://github.com/HenrikBengtsson/aroma.light";)
+    (synopsis "Methods for normalization and visualization of microarray data")
+    (description
+     "This package provides methods for microarray analysis that take basic
+data types such as matrices and lists of vectors.  These methods can be used
+standalone, be utilized in other packages, or be wrapped up in higher-level
+classes.")
+    (license license:gpl2+)))
+
 (define htslib-for-sambamba
   (let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5"))
     (package



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