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01/02: gnu: Add r-rhtslib.
From: |
Ricardo Wurmus |
Subject: |
01/02: gnu: Add r-rhtslib. |
Date: |
Mon, 22 Aug 2016 14:52:56 +0000 (UTC) |
rekado pushed a commit to branch master
in repository guix.
commit 52765a63ca43a66137272e9826553c072c1ef769
Author: Ricardo Wurmus <address@hidden>
Date: Thu Aug 18 13:09:41 2016 +0200
gnu: Add r-rhtslib.
* gnu/packages/bioinformatics.scm (r-rhtslib): New variable.
---
gnu/packages/bioinformatics.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 233b7a8..ade6e37 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6325,6 +6325,31 @@ two-dimensional genome scans.")
libraries for systems that do not have these available via other means.")
(license license:artistic2.0)))
+(define-public r-rhtslib
+ (package
+ (name "r-rhtslib")
+ (version "1.4.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Rhtslib" version))
+ (sha256
+ (base32
+ "1wgpn9x8abjj7fc087pdavqc3fz0pl5xdh231mgjila18irwlhb3"))))
+ (properties `((upstream-name . "Rhtslib")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-zlibbioc" ,r-zlibbioc)))
+ (inputs
+ `(("zlib" ,zlib)))
+ (home-page "https://github.com/nhayden/Rhtslib")
+ (synopsis "High-throughput sequencing library as an R package")
+ (description
+ "This package provides the HTSlib C library for high-throughput
+nucleotide sequence analysis. The package is primarily useful to developers
+of other R packages who wish to make use of HTSlib.")
+ (license license:lgpl2.0+)))
+
(define-public emboss
(package
(name "emboss")