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03/04: gnu: Add r-org-dm-eg-db.
From: |
Ricardo Wurmus |
Subject: |
03/04: gnu: Add r-org-dm-eg-db. |
Date: |
Wed, 24 Feb 2016 16:28:02 +0000 |
rekado pushed a commit to branch master
in repository guix.
commit 16c53a1e268a41d2d8c329b193d8bfb299490962
Author: Ricardo Wurmus <address@hidden>
Date: Tue Feb 16 17:19:55 2016 +0100
gnu: Add r-org-dm-eg-db.
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): New variable.
---
gnu/packages/bioinformatics.scm | 26 ++++++++++++++++++++++++++
1 files changed, 26 insertions(+), 0 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 34590f1..4f097f6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4309,6 +4309,32 @@ annotations for the human genome.")
annotations for the genome of the model worm Caenorhabditis elegans.")
(license license:artistic2.0)))
+(define-public r-org-dm-eg-db
+ (package
+ (name "r-org-dm-eg-db")
+ (version "3.2.3")
+ (source (origin
+ (method url-fetch)
+ ;; We cannot use bioconductor-uri here because this tarball is
+ ;; located under "data/annotation/" instead of "bioc/".
+ (uri (string-append "http://www.bioconductor.org/packages/"
+ "release/data/annotation/src/contrib/"
+ "org.Dm.eg.db_" version ".tar.gz"))
+ (sha256
+ (base32
+ "0mib46c7nr00l7mh290n383za9hyl91a1dc6jhjbk884jmxaxyz6"))))
+ (properties
+ `((upstream-name . "org.Dm.eg.db")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotationdbi" ,r-annotationdbi)))
+ (home-page "http://www.bioconductor.org/packages/org.Dm.eg.db/")
+ (synopsis "Genome wide annotation for Fly")
+ (description
+ "This package provides mappings from Entrez gene identifiers to various
+annotations for the genome of the model fruit fly Drosophila melanogaster.")
+ (license license:artistic2.0)))
+
(define-public r-qtl
(package
(name "r-qtl")