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[Gnumed-bugs] <bug>: Error on Saving new encounter entry
|
From: |
MaAn = maan |
|
Subject: |
[Gnumed-bugs] <bug>: Error on Saving new encounter entry |
|
Date: |
Mon, 27 Aug 2012 09:01:58 -0400 |
Report sent via GNUmed's handler for unexpected exceptions.
user comment : Error on Saving new encounter entry
client version: 1.2.1
system account: marc
staff member : Marc Angermann (MaAn = maan)
sender email : address@hidden
# enable Launchpad bug tracking
affects gnumed
tag automatic-report
importance medium
2012-08-27 07:59:41 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::__setup_logging() #229): --------
start of logging ------------------------------
2012-08-27 07:59:41 INFO gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::__setup_logging() #230): log file
is </home/marc/.gnumed/gnumed-3729.log>
2012-08-27 07:59:41 INFO gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::__setup_logging() #231): log
level is [DEBUG]
2012-08-27 07:59:41 INFO gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::__setup_logging() #232): log file
encoding is <utf8>
2012-08-27 07:59:41 INFO gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::__setup_logging() #233): initial
python.str -> python.unicode encoding is <ANSI_X3.4-1968>
2012-08-27 07:59:41 INFO gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::log_startup_info() #262): Starting up as
main module ($Revision: 1.169 $).
2012-08-27 07:59:41 INFO gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::log_startup_info() #263): GNUmed client
version [1.2.1] on branch [1.2]
2012-08-27 07:59:41 INFO gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::log_startup_info() #264): Platform:
('Linux', 'praxis', '3.2.0-3-amd64', '#1 SMP Mon Jul 23 02:45:17 UTC 2012',
'x86_64', '')
2012-08-27 07:59:41 INFO gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::log_startup_info() #265): Python 2.7.3rc2
(default, Apr 22 2012, 22:30:17)
[GCC 4.6.3] on linux2 (posix)
2012-08-27 07:59:42 INFO gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::log_startup_info() #268): {'DESCRIPTION':
u'Debian GNU/Linux testing (wheezy)', 'RELEASE': u'testing', 'CODENAME':
'wheezy', 'OS': 'GNU/Linux', 'ID': 'Debian'}
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::<module>() #19): $Revision: 1.20 $
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_cli() #430): adding command
line arguments
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_cli() #431): raw command line
is:
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_cli() #432):
['/usr/share/gnumed/Gnumed/gnumed.py', '--override-schema-check']
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--debug] not
in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--slave] not
in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option
[--skip-update-check] not in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--hipaa] not
in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option
[--local-import] not in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::setup_local_repo_path() #204):
[/home/marc/.gnumed/local_code/1.2/Gnumed/wxGladeWidgets] not found
2012-08-27 07:59:42 INFO gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::setup_local_repo_path() #205): local
wxGlade widgets repository not available
2012-08-27 07:59:42 INFO gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::<module>() #61): $Revision: 1.50 $
2012-08-27 07:59:42 INFO gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::<module>() #60): $Revision:
1.34 $
2012-08-27 07:59:42 INFO gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::<module>() #61): mx.DateTime
version: 3.2.1
2012-08-27 07:59:42 INFO gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #29): $Revision: 1.18
$
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #68): known hooks:
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
post_patient_activation
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
post_person_creation
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
shutdown-post-GUI
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
startup-after-GUI-init
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
startup-before-GUI
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
request_user_attention
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
app_activated_startup
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70): app_activated
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70): app_deactivated
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
after_substance_intake_modified
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
after_test_result_modified
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
after_soap_modified
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
after_code_link_modified
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
after_new_doc_created
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70): before_print_doc
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70): before_fax_doc
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70): before_mail_doc
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
before_print_doc_part
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
before_fax_doc_part
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
before_mail_doc_part
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
before_external_doc_access
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::<module>() #70):
db_maintenance_warning
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #124):
unmodified startup locale settings (should be [C])
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #126):
current locale settings:
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #127):
locale.get_locale(): (None, None)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_NUMERIC): (None, None)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_MESSAGES): (None, None)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_MONETARY): (None, None)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_COLLATE): (None, None)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_CTYPE): (None, None)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_TIME): (None, None)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_NUMERIC): C)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_MESSAGES): C)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_MONETARY): C)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_COLLATE): C)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_CTYPE): C)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_ALL): C)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_TIME): C)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #135):
locale.getdefaultlocale() - default (user) locale: ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #139):
encoding sanity check (also check "locale.nl_langinfo(CODESET)" below):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #144):
sys.getdefaultencoding(): [ascii]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #145):
locale.getpreferredencoding(): [ANSI_X3.4-1968]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #146):
locale.getlocale()[1]: [None]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #147):
sys.getfilesystemencoding(): [UTF-8]
2012-08-27 07:59:42 WARNING gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #154):
encoding suggested by locale (ANSI_X3.4-1968) does not match encoding currently
set in locale (None)
2012-08-27 07:59:42 WARNING gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #155):
this might lead to encoding errors
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #160):
<codecs> module CAN handle encoding [ANSI_X3.4-1968]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #160):
<codecs> module CAN handle encoding [ascii]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #160):
<codecs> module CAN handle encoding [UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #163): on
Linux you can determine a likely candidate for the encoding by running "locale
charmap"
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #165):
locale related environment variables (${LANG} is typically used):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #170):
${LANGUAGE} not set
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #170):
${LC_ALL} not set
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #170):
${LC_CTYPE} not set
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #168):
${LANG}=de_DE.UTF-8
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #172):
database of locale conventions:
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(mon_decimal_point):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(int_frac_digits): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(p_sep_by_space): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(frac_digits): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(thousands_sep):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(n_sign_posn): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(decimal_point): .
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(int_curr_symbol):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(n_cs_precedes): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(p_sign_posn): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(mon_thousands_sep):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(negative_sign):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(currency_symbol):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(n_sep_by_space): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(mon_grouping): []
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(p_cs_precedes): 127
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(positive_sign):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #176):
locale.localeconv(grouping): []
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(D_FMT): %m/%d/%y
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(D_T_FMT): %a %b %e %H:%M:%S %Y
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(YESEXPR): ^[yY]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(ALT_DIGITS):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(T_FMT_AMPM): %I:%M:%S %p
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(RADIXCHAR): .
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(ERA_D_FMT):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(T_FMT): %H:%M:%S
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(NOEXPR): ^[nN]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(CRNCYSTR): -
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(ERA):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(CODESET): ANSI_X3.4-1968
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(THOUSEP):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #191):
locale.nl_langinfo(ERA_D_T_FMT):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::get_encoding() #420): *actual*
encoding of locale is None, using encoding *recommended* by locale
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #200):
gmI18N.get_encoding(): ANSI_X3.4-1968
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::activate_locale() #251):
activating user-default locale with <locale.setlocale(locale.LC_ALL, '')>
returns: [de_DE.UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #124):
locale settings after activating user-default locale
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #126):
current locale settings:
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #127):
locale.get_locale(): ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_NUMERIC): ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_MESSAGES): ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_MONETARY): ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_COLLATE): ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_CTYPE): ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #129):
locale.get_locale(LC_TIME): ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_NUMERIC): de_DE.UTF-8)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_MESSAGES): de_DE.UTF-8)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_MONETARY): de_DE.UTF-8)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_COLLATE): de_DE.UTF-8)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_CTYPE): de_DE.UTF-8)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_ALL): de_DE.UTF-8)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #132):
(locale.set_locale(LC_TIME): de_DE.UTF-8)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #135):
locale.getdefaultlocale() - default (user) locale: ('de_DE', 'UTF-8')
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #139):
encoding sanity check (also check "locale.nl_langinfo(CODESET)" below):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #144):
sys.getdefaultencoding(): [ascii]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #145):
locale.getpreferredencoding(): [UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #146):
locale.getlocale()[1]: [UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #147):
sys.getfilesystemencoding(): [UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #160):
<codecs> module CAN handle encoding [UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #160):
<codecs> module CAN handle encoding [UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #160):
<codecs> module CAN handle encoding [ascii]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #160):
<codecs> module CAN handle encoding [UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #163): on
Linux you can determine a likely candidate for the encoding by running "locale
charmap"
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #165):
locale related environment variables (${LANG} is typically used):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #170):
${LANGUAGE} not set
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #170):
${LC_ALL} not set
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #170):
${LC_CTYPE} not set
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #168):
${LANG}=de_DE.UTF-8
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #172):
database of locale conventions:
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(mon_decimal_point): ,
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(int_frac_digits): 2
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(p_sep_by_space): 1
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(frac_digits): 2
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(thousands_sep): .
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(n_sign_posn): 1
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(decimal_point): ,
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(int_curr_symbol): EUR
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(n_cs_precedes): 0
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(p_sign_posn): 1
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(mon_thousands_sep): .
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(negative_sign): -
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #181):
locale.localeconv(currency_symbol): â¬
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(n_sep_by_space): 1
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(mon_grouping): [3, 3, 0]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(p_cs_precedes): 0
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(positive_sign):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #179):
locale.localeconv(grouping): [3, 3, 0]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(D_FMT): %d.%m.%Y
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(D_T_FMT): %a %d %b %Y %T %Z
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(YESEXPR): ^[jJyY].*
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(ALT_DIGITS):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(T_FMT_AMPM):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(RADIXCHAR): ,
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(ERA_D_FMT):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(T_FMT): %T
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(NOEXPR): ^[nN].*
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #196):
locale.nl_langinfo(CRNCYSTR): +â¬
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(ERA):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(CODESET): UTF-8
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(THOUSEP): .
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #194):
locale.nl_langinfo(ERA_D_T_FMT):
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__log_locale_settings() #200):
gmI18N.get_encoding(): UTF-8
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__split_locale_into_levels()
#97): splitting canonical locale [de_DE] into levels
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::__split_locale_into_levels()
#106): system locale levels: {'country': 'de_DE', 'full': 'de_DE', 'language':
'de'}
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option
[--text-domain] not in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option
[--lang-gettext] not in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::local-import] found in source [internal]
2012-08-27 07:59:42 INFO gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #280): domain
not specified, deriving from script name
2012-08-27 07:59:42 INFO gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #283): text
domain is [gnumed]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #286): searching
message catalog file for system locale [de_DE]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #293):
${LANGUAGE} = [None]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #293): ${LC_ALL}
= [None]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #293):
${LC_MESSAGES} = [None]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #293): ${LANG} =
[de_DE.UTF-8]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #320): system is
POSIX, looking in standard locations (see Python Manual)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #329): looking
at ${GNUMED_DIR}
2012-08-27 07:59:42 INFO gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #335):
${GNUMED_DIR} not set
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #344): looking
above binary install directory [/usr/share/gnumed/po]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #348): looking
in binary install directory [/usr/share/gnumed/Gnumed/po]
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #353): trying
[/usr/share/locale](/de_DE/LC_MESSAGES/gnumed.mo)
2012-08-27 07:59:42 DEBUG gm.i18n
(/usr/share/gnumed/Gnumed/pycommon/gmI18N.py::install_domain() #367): found msg
catalog: [Translate this or i18n into <en_EN> will not work properly !] =>
[Ãbersetzen oder Bauchplatscher !]
2012-08-27 07:59:42 INFO gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::set_string_encoding() #193):
setting python.str -> python.unicode encoding to <UTF-8> (locale.getlocale)
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--help] not
in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [-h] not in
group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [-?] not in
group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--version]
not in group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [-V] not in
group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #135): wxPython not
available
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #136): detecting
paths directly
2012-08-27 07:59:42 INFO gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #142): app name
passed in as [gnumed]
2012-08-27 07:59:42 INFO gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #180): previous
temp dir: /tmp
2012-08-27 07:59:42 INFO gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #182): intermediate
temp dir: /tmp/gnumed
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::_set_tmp_dir() #308): previous
temp dir: /tmp/gnumed
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #224):
sys.argv[0]: /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #225): local
application base dir: /usr/share/gnumed/Gnumed
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #226): current
working dir: /home/marc
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #228): user home
dir: /home/marc
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #229):
user-specific config dir: /home/marc/.gnumed
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #230): system-wide
config dir: /etc/gnumed
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #231): system-wide
application data dir: /usr/share/gnumed
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #232): temporary
dir: /tmp/gnumed/gm-gTIGXI
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #124):
mx.DateTime.now(): [2012-08-27 07:59:42,56]
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #125): datetime.now()
: [2012-08-27 07:59:42.559751]
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #126):
time.localtime() : [time.struct_time(tm_year=2012, tm_mon=8, tm_mday=27,
tm_hour=7, tm_min=59, tm_sec=42, tm_wday=0, tm_yday=240, tm_isdst=1)]
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #127): time.gmtime()
: [time.struct_time(tm_year=2012, tm_mon=8, tm_mday=27, tm_hour=5, tm_min=59,
tm_sec=42, tm_wday=0, tm_yday=240, tm_isdst=0)]
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #132): $TZ not defined
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #134): time.daylight:
[1] (whether or not DST is locally used at all)
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #135): time.timezone:
[-3600] seconds
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #136): time.altzone :
[-7200] seconds
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #137): time.tzname :
[CET / CEST] (non-DST / DST)
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #138):
mx.DateTime.now().gmtoffset(): [02:00:00,00]
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #151): DST currently
in effect: [True]
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #160): DST currently
in effect: using UTC offset of [7200] seconds instead of [3600] seconds
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #166): UTC offset is
positive, assuming EAST of Greenwich (clock is "ahead")
2012-08-27 07:59:42 DEBUG gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::init() #174): ISO timezone:
[02:00:00,00] (taken from mx.DateTime.now().gmtoffset())
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--conf-file]
not in group [cli] in source [cli]
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #368): file
source "workbase": /home/marc/gnumed.conf (UTF-8)
2012-08-27 07:59:42 ERROR gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #381): cannot
open [/home/marc/gnumed.conf], keeping as dummy source
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #368): file
source "system": /etc/gnumed/gnumed-client.conf (UTF-8)
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::parse_INI_stream() #197): parsing
INI-style data stream [<open file u'/etc/gnumed/gnumed-client.conf', mode 'rb'
at 0x16eb420>]
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #368): file
source "user": /home/marc/.gnumed/gnumed.conf (UTF-8)
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::parse_INI_stream() #197): parsing
INI-style data stream [<open file u'/home/marc/.gnumed/gnumed.conf', mode 'rb'
at 0x16eb420>]
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #368): file
source "local": /usr/share/gnumed/Gnumed/gnumed.conf (UTF-8)
2012-08-27 07:59:42 ERROR gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #381): cannot
open [/usr/share/gnumed/Gnumed/gnumed.conf], keeping as dummy source
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #368): file
source "explicit": None (UTF-8)
2012-08-27 07:59:42 WARNING gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #373): file
[None] already known as source [workbase]
2012-08-27 07:59:42 WARNING gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #374): adding
it as source [explicit] may provoke trouble
2012-08-27 07:59:42 WARNING gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #373): file
[None] already known as source [local]
2012-08-27 07:59:42 WARNING gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #374): adding
it as source [explicit] may provoke trouble
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #368): file
source "user-mime": /home/marc/.gnumed/mime_type2file_extension.conf (UTF-8)
2012-08-27 07:59:42 ERROR gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #381): cannot
open [/home/marc/.gnumed/mime_type2file_extension.conf], keeping as dummy source
2012-08-27 07:59:42 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #368): file
source "system-mime": /etc/gnumed/mime_type2file_extension.conf (UTF-8)
2012-08-27 07:59:42 ERROR gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::add_file_source() #381): cannot
open [/etc/gnumed/mime_type2file_extension.conf], keeping as dummy source
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--ui] not in
group [cli] in source [cli]
2012-08-27 07:59:42 DEBUG gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::setup_ui_type() #502): UI type: wxp
2012-08-27 07:59:42 INFO gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmLoginInfo.py::<module>() #13): $Revision:
1.17 $
2012-08-27 07:59:42 INFO gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::<module>() #30): $Revision: 1.127 $
2012-08-27 07:59:42 INFO gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::<module>() #43): psycopg2 version:
2.4.5 (dt dec mx pq3 ext)
2012-08-27 07:59:42 INFO gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::<module>() #44): PostgreSQL via
DB-API module "<module 'psycopg2' from
'/usr/lib/python2.7/dist-packages/psycopg2/__init__.pyc'>": API level 2.0,
thread safety 2, parameter style "pyformat"
2012-08-27 07:59:42 DEBUG psycopg2
(/usr/lib/python2.7/dist-packages/psycopg2/pool.py::<module>() #40): installed.
Logging using Python logging module
2012-08-27 07:59:42 INFO gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::<module>() #71): assuming default
client encoding of [UTF8]
2012-08-27 07:59:42 INFO gm.launcher
(/usr/share/gnumed/Gnumed/gnumed.py::setup_backend() #507): client expects
database version [17]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [client
timezone] not in group [backend] in source [explicit]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [client
timezone] not in group [backend] in source [workbase]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [client
timezone] not in group [backend] in source [local]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [client
timezone] not in group [backend] in source [user]
2012-08-27 07:59:42 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [client
timezone] not in group [backend] in source [system]
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::import_hook_module() #117): hook
script stat(): posix.stat_result(st_mode=33152, st_ino=2097978, st_dev=65029L,
st_nlink=1, st_uid=1000, st_gid=1000, st_size=562, st_atime=1333056979,
st_mtime=1333056979, st_ctime=1333056979)
2012-08-27 07:59:42 DEBUG gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::import_hook_module() #119): hook
script mode: 384 (oktal: 0600)
2012-08-27 07:59:42 INFO gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::import_module_from_directory()
#422): appending to sys.path: [/home/marc/.gnumed/scripts]
2012-08-27 07:59:42 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::import_module_from_directory()
#426): will remove import path: True
2012-08-27 07:59:42 INFO gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::import_module_from_directory()
#439): imported module [hook_script] as [<module 'hook_script' from
'/home/marc/.gnumed/scripts/hook_script.pyc'>]
2012-08-27 07:59:42 INFO gm.hook
(/usr/share/gnumed/Gnumed/pycommon/gmHooks.py::import_hook_module() #140): hook
script: /home/marc/.gnumed/scripts/hook_script.py
2012-08-27 07:59:43 INFO gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg.py::<module>() #39): $Revision: 1.60 $
2012-08-27 07:59:43 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::<module>() #18): $Revision:
1.13 $
2012-08-27 07:59:43 INFO gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmBackendListener.py::<module>() #19):
$Revision: 1.22 $
2012-08-27 07:59:43 INFO gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmBusinessDBObject.py::<module>() #142):
$Revision: 1.60 $
2012-08-27 07:59:43 INFO gm.ui
(/usr/share/gnumed/Gnumed/pycommon/gmMatchProvider.py::<module>() #21):
$Revision: 1.34 $
2012-08-27 07:59:43 INFO gm.business
(/usr/share/gnumed/Gnumed/business/gmDemographicRecord.py::<module>() #30):
$Revision: 1.106 $
2012-08-27 07:59:43 INFO gm.domain
(/usr/share/gnumed/Gnumed/business/gmAllergy.py::<module>() #17): $Revision:
1.34 $
2012-08-27 07:59:43 INFO gm.lab
(/usr/share/gnumed/Gnumed/business/gmPathLab.py::<module>() #28): $Revision:
1.81 $
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [test_result_mod_db]
2012-08-27 07:59:43 INFO gm.coding
(/usr/share/gnumed/Gnumed/business/gmCoding.py::<module>() #21): $Revision: 1.2
$
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [episode_code_mod_db]
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [rfe_code_mod_db]
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [aoe_code_mod_db]
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [health_issue_code_mod_db]
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [narrative_code_mod_db]
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [procedure_code_mod_db]
2012-08-27 07:59:43 INFO gm.emr
(/usr/share/gnumed/Gnumed/business/gmClinNarrative.py::<module>() #23):
$Revision: 1.45 $
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [clin_narrative_mod_db]
2012-08-27 07:59:43 INFO gm.emr
(/usr/share/gnumed/Gnumed/business/gmEMRStructItems.py::<module>() #28):
$Revision: 1.157 $
2012-08-27 07:59:43 INFO gm.atc
(/usr/share/gnumed/Gnumed/business/gmATC.py::<module>() #21): $Revision: 1.7 $
2012-08-27 07:59:43 INFO gm.docs
(/usr/share/gnumed/Gnumed/pycommon/gmMimeLib.py::<module>() #23): $Revision:
1.27 $
2012-08-27 07:59:43 INFO gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::<module>() #23): $Revision:
1.118 $
2012-08-27 07:59:43 INFO gm.meds
(/usr/share/gnumed/Gnumed/business/gmMedication.py::<module>() #40): $Revision:
1.21 $
2012-08-27 07:59:43 ERROR gm.messaging
(/usr/share/gnumed/Gnumed/pycommon/gmDispatcher.py::connect() #94): unknown
signal [substance_intake_mod_db]
2012-08-27 07:59:43 INFO gm.vaccination
(/usr/share/gnumed/Gnumed/business/gmVaccination.py::<module>() #18):
$Revision: 1.38 $
2012-08-27 07:59:43 DEBUG gm.emr
(/usr/share/gnumed/Gnumed/business/gmClinicalRecord.py::<module>() #56):
$Revision: 1.308 $
2012-08-27 07:59:43 INFO gm.person
(/usr/share/gnumed/Gnumed/business/gmPerson.py::<module>() #34): $Revision:
1.198 $
2012-08-27 07:59:43 INFO gm.export
(/usr/share/gnumed/Gnumed/exporters/gmPatientExporter.py::<module>() #30):
$Revision: 1.138 $
2012-08-27 07:59:44 INFO gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::<module>()
#20): $Revision: 1.17 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmAuthWidgets.py::<module>() #29):
$Revision: 1.45 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmEditArea.py::<module>() #23): $Revision:
1.135 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmCfgWidgets.py::<module>() #30): $Revision:
1.4 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmDataMiningWidgets.py::<module>() #29):
$Revision: 1.14 $
2012-08-27 07:59:44 INFO gm.kvk
(/usr/share/gnumed/Gnumed/business/gmKVK.py::<module>() #29): $Revision: 1.22 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::<module>() #27): $Revision:
1.47 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmResizingWidgets.py::<module>() #23):
$Revision: 1.55 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmSOAPWidgets.py::<module>() #22):
$Revision: 1.114 $
2012-08-27 07:59:44 INFO gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::<module>() #47): $Revision: 1.79
$
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmDocumentWidgets.py::<module>() #35):
$Revision: 1.187 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py::<module>() #49):
$Revision: 1.46 $
2012-08-27 07:59:44 INFO gm.vaccination
(/usr/share/gnumed/Gnumed/wxpython/gmVaccWidgets.py::<module>() #31):
$Revision: 1.36 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmEMRBrowser.py::<module>() #32): $Revision:
1.111 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmFormWidgets.py::<module>() #22):
$Revision: 1.16 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmMedicationWidgets.py::<module>() #24):
$Revision: 1.33 $
2012-08-27 07:59:44 INFO gm.loinc
(/usr/share/gnumed/Gnumed/business/gmLOINC.py::<module>() #22): $Revision: 1.7 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmMeasurementWidgets.py::<module>() #47):
$Revision: 1.66 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmI18nWidgets.py::<module>() #35):
$Revision: 1.4 $
2012-08-27 07:59:44 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmCodingWidgets.py::<module>() #27):
$Revision: 1.4 $
2012-08-27 07:59:44 INFO gm.main
(/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py::<module>() #91): $Revision:
1.491 $
2012-08-27 07:59:44 INFO gm.main
(/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py::<module>() #92): wxPython GUI
framework: 2.8.12.1 ('__WXGTK__', 'wxGTK', 'unicode', 'gtk2',
'wx-assertions-off', 'SWIG-1.3.29')
2012-08-27 07:59:44 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--profile]
not in group [cli] in source [cli]
2012-08-27 07:59:44 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [workplace] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [workplace] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [workplace] in source [local]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [workplace] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[workplace::help desk] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::client_version] found in source [internal]
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #136): detecting
paths directly
2012-08-27 07:59:45 INFO gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #142): app name
passed in as [gnumed]
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #176): temp dir
already set
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #224):
sys.argv[0]: /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #225): local
application base dir: /usr/share/gnumed/Gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #226): current
working dir: /home/marc
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #228): user home
dir: /home/marc
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #229):
user-specific config dir: /home/marc/.gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #230): system-wide
config dir: /etc/gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #231): system-wide
application data dir: /usr/share/gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #232): temporary
dir: /tmp/gnumed/gm-gTIGXI
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #190): re-detecting
paths with wxPython
2012-08-27 07:59:45 INFO gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::init_paths() #193): wxPython app
name is [gnumed]
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #224):
sys.argv[0]: /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #225): local
application base dir: /usr/share/gnumed/Gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #226): current
working dir: /home/marc
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #228): user home
dir: /home/marc
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #229):
user-specific config dir: /home/marc/.gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #230): system-wide
config dir: /etc/gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #231): system-wide
application data dir: /usr/share/gnumed
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::__log_paths() #232): temporary
dir: /tmp/gnumed/gm-gTIGXI
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--conf-file]
not in group [cli] in source [cli]
2012-08-27 07:59:45 INFO gm.main
(/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py::__setup_prefs_file() #3185):
user preferences file: /home/marc/.gnumed/gnumed.conf
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [user email]
not in group [preferences] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [user email]
not in group [preferences] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [user email]
not in group [preferences] in source [local]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [user email]
not in group [preferences] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [user email]
not in group [preferences] in source [system]
2012-08-27 07:59:45 INFO gm.main
(/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py::__setup_platform() #3260):
running on GTK (probably Linux)
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[cli::--override-schema-check] found in source [cli]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::client_branch] found in source [internal]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::client_version] found in source [internal]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [name] not in
group [workplace] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [name] not in
group [workplace] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [name] not in
group [workplace] in source [local]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [name] not in
group [workplace] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[workplace::name] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [profiles]
not in group [backend] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[backend::profiles] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [profiles]
not in group [backend] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [profiles]
not in group [backend] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [host] not in
group [profile GNUmed database on this machine] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [host] not in
group [profile GNUmed database on this machine] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [host] not in
group [profile GNUmed database on this machine] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database on this machine::host] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [port] not in
group [profile GNUmed database on this machine] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [port] not in
group [profile GNUmed database on this machine] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [port] not in
group [profile GNUmed database on this machine] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database on this machine::port] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [database]
not in group [profile GNUmed database on this machine] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [database]
not in group [profile GNUmed database on this machine] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [database]
not in group [profile GNUmed database on this machine] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database on this machine::database] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database on this machine] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database on this machine] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database on this machine] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database on this machine] in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [public/open
access] not in group [profile GNUmed database on this machine] in source
[explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [public/open
access] not in group [profile GNUmed database on this machine] in source
[workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [public/open
access] not in group [profile GNUmed database on this machine] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database on this machine::public/open access] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [profile GNUmed database on this machine] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [profile GNUmed database on this machine] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [profile GNUmed database on this machine] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database on this machine::help desk] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [host] not in
group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [host] not in
group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [host] not in
group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database at publicdb.gnumed.de (PUBLIC)::host] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [port] not in
group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [port] not in
group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [port] not in
group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database at publicdb.gnumed.de (PUBLIC)::port] found in source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [database]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [database]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [database]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database at publicdb.gnumed.de (PUBLIC)::database] found in source
[system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [encoding]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [public/open
access] not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)]
in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [public/open
access] not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)]
in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [public/open
access] not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)]
in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database at publicdb.gnumed.de (PUBLIC)::public/open access] found in
source [system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [help desk]
not in group [profile GNUmed database at publicdb.gnumed.de (PUBLIC)] in source
[user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option [profile
GNUmed database at publicdb.gnumed.de (PUBLIC)::help desk] found in source
[system]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [logins] not
in group [backend] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [logins] not
in group [backend] in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [logins] not
in group [backend] in source [workbase]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [login] not
in group [preferences] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[preferences::login] found in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [profile] not
in group [preferences] in source [explicit]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[preferences::profile] found in source [user]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 07:59:45 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::slave] found in source [internal]
2012-08-27 07:59:45 DEBUG gm.tools
(/usr/share/gnumed/Gnumed/pycommon/gmTools.py::get_icon() #810): icon found in
[/usr/share/gnumed/bitmaps/gm_icon-serpent_and_gnu.png]
2012-08-27 07:59:45 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmAuthWidgets.py::connect_to_database()
#118): login attempt 1 of 3
2012-08-27 07:59:52 INFO gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmAuthWidgets.py::__on_login_button_pressed()
#777): debug mode disabled
2012-08-27 07:59:52 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #312): option [--quiet] not
in group [cli] in source [cli]
2012-08-27 07:59:53 WARNING gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::__validate_timezone() #227): time
zone [CEST] is not settable
2012-08-27 07:59:54 WARNING gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::sanity_check_database_settings()
#1687): PG option [log_connections] set to [off], expected [on], risk:
<non-compliance with HIPAA>
2012-08-27 07:59:54 WARNING gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::sanity_check_database_settings()
#1687): PG option [log_disconnections] set to [off], expected [on], risk:
<non-compliance with HIPAA>
2012-08-27 08:31:37 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 08:31:37 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 08:31:37 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 08:31:37 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 08:31:37 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 08:31:43 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 08:31:46 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 08:32:06 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::update_data_from_file()
#308): [/tmp/gnumed/gm-gTIGXI/gm-L-Template-nSmFNq-instance.tex] is not a
readable file
2012-08-27 08:32:06 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_part() #513): cannot
import binary data from
[/tmp/gnumed/gm-gTIGXI/gm-L-Template-nSmFNq-instance.tex] into document part
2012-08-27 08:32:06 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_parts_from_files()
#533): cannot instantiate document part object
2012-08-27 08:32:06 ERROR gm.person
(/usr/share/gnumed/Gnumed/business/gmPerson.py::_set_locked() #1323):
lock/unlock imbalance, trying to refcount lock depth below 0
2012-08-27 10:04:08 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 10:04:08 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 10:04:08 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 10:04:08 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 10:04:09 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 10:04:14 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 10:04:15 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 10:04:25 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::update_data_from_file()
#308): [/tmp/gnumed/gm-gTIGXI/gm-L-Template-uNX75H-instance.tex] is not a
readable file
2012-08-27 10:04:25 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_part() #513): cannot
import binary data from
[/tmp/gnumed/gm-gTIGXI/gm-L-Template-uNX75H-instance.tex] into document part
2012-08-27 10:04:25 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_parts_from_files()
#533): cannot instantiate document part object
2012-08-27 10:04:25 ERROR gm.person
(/usr/share/gnumed/Gnumed/business/gmPerson.py::_set_locked() #1323):
lock/unlock imbalance, trying to refcount lock depth below 0
2012-08-27 10:38:47 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 10:38:47 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 10:38:47 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 10:38:47 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 10:38:47 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 10:38:53 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 10:38:56 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 10:39:05 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::update_data_from_file()
#308): [/tmp/gnumed/gm-gTIGXI/gm-L-Template-Mh0aay-instance.tex] is not a
readable file
2012-08-27 10:39:05 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_part() #513): cannot
import binary data from
[/tmp/gnumed/gm-gTIGXI/gm-L-Template-Mh0aay-instance.tex] into document part
2012-08-27 10:39:05 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_parts_from_files()
#533): cannot instantiate document part object
2012-08-27 10:39:05 ERROR gm.person
(/usr/share/gnumed/Gnumed/business/gmPerson.py::_set_locked() #1323):
lock/unlock imbalance, trying to refcount lock depth below 0
2012-08-27 10:43:48 ERROR gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::pydt_strftime() #262): Python
cannot strftime() this <datetime>
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py", line 260, in
pydt_strftime
return dt.strftime(format).decode(encoding, 'replace')
ValueError: year=198 is before 1900; the datetime strftime() methods require
year >= 1900
2012-08-27 10:44:36 CRITICAL gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmBusinessDBObject.py::refetch_payload()
#504): [cIdentity:778]: cannot reload, payload changed
2012-08-27 11:17:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 11:17:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 11:17:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 11:17:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 11:17:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 11:17:09 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 11:17:13 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 11:17:23 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::update_data_from_file()
#308): [/tmp/gnumed/gm-gTIGXI/gm-L-Template-FyIP7G-instance.tex] is not a
readable file
2012-08-27 11:17:23 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_part() #513): cannot
import binary data from
[/tmp/gnumed/gm-gTIGXI/gm-L-Template-FyIP7G-instance.tex] into document part
2012-08-27 11:17:23 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_parts_from_files()
#533): cannot instantiate document part object
2012-08-27 11:17:23 ERROR gm.person
(/usr/share/gnumed/Gnumed/business/gmPerson.py::_set_locked() #1323):
lock/unlock imbalance, trying to refcount lock depth below 0
2012-08-27 11:24:58 CRITICAL gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmBusinessDBObject.py::refetch_payload()
#504): [cIdentity:779]: cannot reload, payload changed
2012-08-27 12:20:01 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 12:20:01 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 12:20:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 12:20:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 12:20:02 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 12:20:08 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 12:20:19 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 12:20:28 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::update_data_from_file()
#308): [/tmp/gnumed/gm-gTIGXI/gm-L-Template-y0PnrV-instance.tex] is not a
readable file
2012-08-27 12:20:28 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_part() #513): cannot
import binary data from
[/tmp/gnumed/gm-gTIGXI/gm-L-Template-y0PnrV-instance.tex] into document part
2012-08-27 12:20:28 ERROR gm.docs
(/usr/share/gnumed/Gnumed/business/gmDocuments.py::add_parts_from_files()
#533): cannot instantiate document part object
2012-08-27 12:20:28 ERROR gm.person
(/usr/share/gnumed/Gnumed/business/gmPerson.py::_set_locked() #1323):
lock/unlock imbalance, trying to refcount lock depth below 0
2012-08-27 14:01:54 ERROR gm.datetime
(/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py::pydt_strftime() #262): Python
cannot strftime() this <datetime>
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py", line 260, in
pydt_strftime
return dt.strftime(format).decode(encoding, 'replace')
ValueError: year=196 is before 1900; the datetime strftime() methods require
year >= 1900
2012-08-27 14:02:28 CRITICAL gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmBusinessDBObject.py::refetch_payload()
#504): [cIdentity:780]: cannot reload, payload changed
2012-08-27 14:51:50 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/148695": No space left on
device
TIP: Check free disk space.
2012-08-27 14:51:50 ERROR gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#182): enabling debug mode
2012-08-27 14:51:50 DEBUG gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#186): unhandled exception caught:
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1236, in
_on_save_note_button_pressed
gmTools.none_if(self._TCTRL_rfe.GetValue().strip(), u'')
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1419, in
save_current_editor
if not page.save(emr = emr, episode_name_candidates =
episode_name_candidates, encounter = encounter):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1645, in
save
encounter_id = encounter
File "/usr/share/gnumed/Gnumed/business/gmClinNarrative.py", line 265, in
create_clin_narrative
rows, idx = gmPG2.run_rw_queries(queries = queries, return_data = True,
get_col_idx = True)
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/148695": No space left on
device
TIP: Check free disk space.
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1236 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = None
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1561]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:51:49.744257+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt,
Narbe, C1+2<<', u'issue_active: NULL', 'pk_episode: >>1561<<', u'health_issue:
NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
'pk_health_issue: >>772<<', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111282<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
data = [cNarrative:8298]: ['xmin_clin_narrative_14: >>111284<<',
'pk_episode: >>1561<<', u'soap_cat: >>o<<', 'pk_narrative: >>8298<<',
'pk_health_issue: >>772<<', 'pk_patient: >>780<<', u'provider: >>MaAn<<',
'pk_encounter: >>2934<<', 'row_version: >>0<<', 'xmin_clin_narrative:
>>111284<<', 'modified_when: >>2012-08-27 14:51:49.944279+02:00<<',
u'narrative: >>C1+2 re, Kiefergelenk re, Dura re parietal, Narbe LWS, Plexus
pharyngeus re, Uterus/Ovar li, sek. Becken<<', 'date: >>2012-08-27
14:51:49.944279+02:00<<', 'pk_generic_codes: >>[]<<', 'pk_item: >>8309<<']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['a', u'Dysfunktion Kiefergelenk, Dysfunktion Halswirbels\xe4ule,
Narbenst\xf6rung Lendenwirbels\xe4ule']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = [<Gnumed.business.gmClinNarrative.cNarrative object at
0x2a9a790>, <Gnumed.business.gmClinNarrative.cNarrative object at 0x2a9ac90>]
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
saved = True
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Dysfunktion Kiefergelenk, Dysfunktion
Halswirbels\xe4ule, Narbenst\xf6rung Lendenwirbels\xe4ule', 'enc': 2934,
'soap': 'a', 'epi': 1561}
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = a
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1561
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Dysfunktion Kiefergelenk, Dysfunktion Halswirbelsäule,
Narbenstörung Lendenwirbelsäule
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1561,
u'Dysfunktion Kiefergelenk, Dysfunktion Halswirbels\xe4ule, Narbenst\xf6rung
Lendenwirbels\xe4ule', 'a']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1275 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x7fcbbc083630>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1561, u'Dysfunktion Kiefergelenk, Dysfunktion
Halswirbels\xe4ule, Narbenst\xf6rung Lendenwirbels\xe4ule', 'a']
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at
0x7fcbbc083630>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1561,
u'Dysfunktion Kiefergelenk, Dysfunktion Halswirbels\xe4ule, Narbenst\xf6rung
Lendenwirbels\xe4ule', 'a']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1561,
u'Dysfunktion Kiefergelenk, Dysfunktion Halswirbels\xe4ule, Narbenst\xf6rung
Lendenwirbels\xe4ule', 'a']}
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x7fcbbc083630; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 1>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at
0x7fcbbc083630>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:51:50 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1561, u'Dysfunktion Kiefergelenk, Dysfunktion
Halswirbels\xe4ule, Narbenst\xf6rung Lendenwirbels\xe4ule', 'a']
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15530, readonly: False
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15531, readonly: False
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15532, readonly: False
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15533, readonly: False
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15534, readonly: False
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:51:50 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:51:54 WARNING gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#214): syncing log file for backup to
[/home/marc/gnumed/logs/gnumed-3729_2012-08-27_14-51-50.log]
2012-08-27 14:51:54 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::flush() #116): -------- synced
log file -------------------------------
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15537, readonly: False
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15538, readonly: False
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15539, readonly: False
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:03 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:04 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15540, readonly: False
2012-08-27 14:52:04 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:04 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15542, readonly: False
2012-08-27 14:52:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:15 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1236 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1562]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:52:03.689812+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt,
Narbe, C1<<', u'issue_active: NULL', 'pk_episode: >>1562<<', u'health_issue:
NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111287<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1562}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1562
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1562,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1267 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298de50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298de50; closed: 0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x39361d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1562, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x39361d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1562,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1562,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x39361d0; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x39361d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298de50; closed: 0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1562, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:15 DEBUG gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#165): unhandled exception caught:
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1236, in
_on_save_note_button_pressed
gmTools.none_if(self._TCTRL_rfe.GetValue().strip(), u'')
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1419, in
save_current_editor
if not page.save(emr = emr, episode_name_candidates =
episode_name_candidates, encounter = encounter):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1645, in
save
encounter_id = encounter
File "/usr/share/gnumed/Gnumed/business/gmClinNarrative.py", line 265, in
create_clin_narrative
rows, idx = gmPG2.run_rw_queries(queries = queries, return_data = True,
get_col_idx = True)
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:52:15 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1236 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1562]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:52:03.689812+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt,
Narbe, C1<<', u'issue_active: NULL', 'pk_episode: >>1562<<', u'health_issue:
NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111287<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1562}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1562
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1562,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1275 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298de50>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298de50; closed: -1>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x39361d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1562, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x39361d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1562,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1562,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x39361d0; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 1>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x39361d0>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298de50; closed: -1>
2012-08-27 14:52:15 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1562, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:16 WARNING gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#214): syncing log file for backup to
[/home/marc/gnumed/logs/gnumed-3729_2012-08-27_14-52-15.log]
2012-08-27 14:52:16 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::flush() #116): -------- synced
log file -------------------------------
2012-08-27 14:52:17 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:52:17 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=5* -> event.GetSelection()=4
2012-08-27 14:52:17 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:52:17 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=5 -> event.GetSelection()=4*
2012-08-27 14:52:18 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15543, readonly: False
2012-08-27 14:52:18 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:18 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:36 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:52:36 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=4* -> event.GetSelection()=5
2012-08-27 14:52:36 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:52:36 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=4 -> event.GetSelection()=5*
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15547, readonly: False
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15548, readonly: False
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15549, readonly: False
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15550, readonly: False
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:42 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15551, readonly: False
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15552, readonly: False
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15553, readonly: False
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:44 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:44 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1236 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1563]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:52:42.667235+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt<<',
u'issue_active: NULL', 'pk_episode: >>1563<<', u'health_issue: NULL',
'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<',
'started_last: >>2012-08-27 14:02:31.317690+02:00<<', 'pk_health_issue:
>>772<<', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111292<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1563}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1563
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1563,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1267 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x7fcbbc078770>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1563, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at
0x7fcbbc078770>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1563,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1563,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x7fcbbc078770; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at
0x7fcbbc078770>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1563, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:44 DEBUG gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#165): unhandled exception caught:
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1236, in
_on_save_note_button_pressed
gmTools.none_if(self._TCTRL_rfe.GetValue().strip(), u'')
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1419, in
save_current_editor
if not page.save(emr = emr, episode_name_candidates =
episode_name_candidates, encounter = encounter):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1645, in
save
encounter_id = encounter
File "/usr/share/gnumed/Gnumed/business/gmClinNarrative.py", line 265, in
create_clin_narrative
rows, idx = gmPG2.run_rw_queries(queries = queries, return_data = True,
get_col_idx = True)
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:52:44 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1236 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1563]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:52:42.667235+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt<<',
u'issue_active: NULL', 'pk_episode: >>1563<<', u'health_issue: NULL',
'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<',
'started_last: >>2012-08-27 14:02:31.317690+02:00<<', 'pk_health_issue:
>>772<<', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111292<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1563}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1563
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1563,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1275 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x7fcbbc078770>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1563, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at
0x7fcbbc078770>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1563,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1563,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x7fcbbc078770; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 1>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at
0x7fcbbc078770>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:52:44 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1563, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:52:45 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15554, readonly: False
2012-08-27 14:52:45 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:45 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:45 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15555, readonly: False
2012-08-27 14:52:45 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:52:45 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:52:50 WARNING gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#214): syncing log file for backup to
[/home/marc/gnumed/logs/gnumed-3729_2012-08-27_14-52-44.log]
2012-08-27 14:52:50 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::flush() #116): -------- synced
log file -------------------------------
2012-08-27 14:52:59 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:52:59 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=5* -> event.GetSelection()=4
2012-08-27 14:52:59 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:52:59 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=5 -> event.GetSelection()=4*
2012-08-27 14:53:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15558, readonly: False
2012-08-27 14:53:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:08 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15559, readonly: False
2012-08-27 14:53:08 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:08 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:08 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15560, readonly: False
2012-08-27 14:53:08 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:08 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15562, readonly: False
2012-08-27 14:53:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15563, readonly: False
2012-08-27 14:53:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:15 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:24 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:53:24 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=4* -> event.GetSelection()=5
2012-08-27 14:53:24 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:53:24 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=4 -> event.GetSelection()=5*
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15565, readonly: False
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15566, readonly: False
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15567, readonly: False
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15568, readonly: False
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:34 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_under_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1257 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = [cEncounter:2934]: ['pk_generic_codes_aoe: >>[]<<',
'last_affirmed_original_tz: >>2012-08-27 14:02:31.337221<<', 'started:
>>2012-08-27 14:02:31.317690+02:00<<', 'pk_type: >>1<<', 'pk_patient: >>780<<',
'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<', u'reason_for_encounter:
NULL', u'l10n_type: >>in Praxis<<', 'pk_encounter: >>2934<<', 'pk_location:
>>-1<<', 'pk_generic_codes_rfe: >>[]<<', 'source_time_zone: >>2:00:00<<',
u'assessment_of_encounter: NULL', u'type: >>in surgery<<', 'xmin_encounter:
>>111276<<', 'started_original_tz: >>2012-08-27 14:02:31.317690<<']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1564]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:53:34.486074+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt<<',
u'issue_active: NULL', 'pk_episode: >>1564<<', u'health_issue: NULL',
'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<',
'started_last: >>2012-08-27 14:02:31.317690+02:00<<', 'pk_health_issue:
>>772<<', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111298<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1564}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1564
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1564,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1267 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298de50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298de50; closed: 0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x38f5620>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1564, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x38f5620>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1564,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1564,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x38f5620; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x38f5620>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298de50; closed: 0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1564, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:53:34 DEBUG gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#165): unhandled exception caught:
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1257, in
_on_save_note_under_button_pressed
gmTools.none_if(self._TCTRL_rfe.GetValue().strip(), u'')
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1419, in
save_current_editor
if not page.save(emr = emr, episode_name_candidates =
episode_name_candidates, encounter = encounter):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1645, in
save
encounter_id = encounter
File "/usr/share/gnumed/Gnumed/business/gmClinNarrative.py", line 265, in
create_clin_narrative
rows, idx = gmPG2.run_rw_queries(queries = queries, return_data = True,
get_col_idx = True)
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:53:34 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_under_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1257 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = [cEncounter:2934]: ['pk_generic_codes_aoe: >>[]<<',
'last_affirmed_original_tz: >>2012-08-27 14:02:31.337221<<', 'started:
>>2012-08-27 14:02:31.317690+02:00<<', 'pk_type: >>1<<', 'pk_patient: >>780<<',
'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<', u'reason_for_encounter:
NULL', u'l10n_type: >>in Praxis<<', 'pk_encounter: >>2934<<', 'pk_location:
>>-1<<', 'pk_generic_codes_rfe: >>[]<<', 'source_time_zone: >>2:00:00<<',
u'assessment_of_encounter: NULL', u'type: >>in surgery<<', 'xmin_encounter:
>>111276<<', 'started_original_tz: >>2012-08-27 14:02:31.317690<<']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1564]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:53:34.486074+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt<<',
u'issue_active: NULL', 'pk_episode: >>1564<<', u'health_issue: NULL',
'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<',
'started_last: >>2012-08-27 14:02:31.317690+02:00<<', 'pk_health_issue:
>>772<<', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111298<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1564}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1564
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1564,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1275 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298de50>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298de50; closed: -1>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x38f5620>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1564, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x38f5620>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1564,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1564,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x38f5620; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 1>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x38f5620>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298de50; closed: -1>
2012-08-27 14:53:34 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1564, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15569, readonly: False
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15570, readonly: False
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15571, readonly: False
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:34 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:36 WARNING gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#214): syncing log file for backup to
[/home/marc/gnumed/logs/gnumed-3729_2012-08-27_14-53-34.log]
2012-08-27 14:53:36 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::flush() #116): -------- synced
log file -------------------------------
2012-08-27 14:53:38 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:53:38 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=5* -> event.GetSelection()=4
2012-08-27 14:53:38 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:53:38 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=5 -> event.GetSelection()=4*
2012-08-27 14:53:38 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15572, readonly: False
2012-08-27 14:53:38 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:38 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15574, readonly: False
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15575, readonly: False
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15576, readonly: False
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15577, readonly: False
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:46 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:52 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15578, readonly: False
2012-08-27 14:53:52 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:52 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:52 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
IntegrityError: update or delete on table "health_issue" violates foreign key
constraint "episode_fk_health_issue_fkey" on table "episode"
DETAIL: Key (pk)=(773) is still referenced from table "episode".
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_tree_item_right_clicked] in
[/usr/share/gnumed/Gnumed/wxpython/gmEMRBrowser.py] at line 813 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
node = <wx._controls.TreeItemId; proxy of <Swig Object of type
'wxTreeItemId *' at 0x3922f00> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmEMRBrowser.cEMRTree; proxy of <Swig Object of
type 'wxPyTreeCtrl *' at 0x3162b80> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pos = (-1, -1)
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._controls.TreeEvent; proxy of <Swig Object of type
'wxTreeEvent *' at 0x7fff7c82fbd0> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [__handle_issue_context] in
[/usr/share/gnumed/Gnumed/wxpython/gmEMRBrowser.py] at line 402 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmEMRBrowser.cEMRTree; proxy of <Swig Object of
type 'wxPyTreeCtrl *' at 0x3162b80> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pos = (-1, -1)
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [PopupMenu] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line
10252 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmEMRBrowser.cEMRTree; proxy of <Swig Object of
type 'wxPyTreeCtrl *' at 0x3162b80> >, <wx._core.Menu; proxy of <Swig Object of
type 'wxMenu *' at 0x316ed30> >, wx.Point(-1, -1))
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [__delete_issue] in
[/usr/share/gnumed/Gnumed/wxpython/gmEMRBrowser.py] at line 526 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmEMRBrowser.cEMRTree; proxy of <Swig Object of
type 'wxPyTreeCtrl *' at 0x3162b80> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
dlg = <Gnumed.wxpython.gmGuiHelpers.c2ButtonQuestionDlg; proxy of <Swig
Object of type 'wxDialog *' at 0x3805000> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
result = 5103
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82e120> >
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [delete_health_issue] in
[/usr/share/gnumed/Gnumed/business/gmEMRStructItems.py] at line 609 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pk = 773
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
health_issue = [cHealthIssue:773]: ['is_confidential: >>False<<',
u'modified_by: >>maan<<', u'description: >>Shunt<<', 'is_cause_of_death:
>>False<<', 'pk_encounter: >>2934<<', u'laterality: NULL',
'xmin_health_issue_18: >>111300<<', 'pk_patient: >>780<<', 'is_active:
>>True<<', 'pk_generic_codes: >>[]<<', u'summary: NULL', 'clinically_relevant:
>>True<<', 'row_version: >>0<<', u'age_noted: NULL', 'xmin_health_issue:
>>111300<<', 'pk_health_issue: >>773<<', u'diagnostic_certainty_classification:
NULL', u'grouping: NULL', 'modified_when: >>2012-08-27 14:53:46.166449+02:00<<']
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1267 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x3b21df0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'pk': 773}
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x3b21df0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'delete from clin.health_issue where pk=%(pk)s',
'args': {'pk': 773}}]
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = False
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'delete from clin.health_issue where pk=%(pk)s', 'args':
{'pk': 773}}
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = None
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x3b21df0; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x3b21df0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = delete from clin.health_issue where pk=%(pk)s
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:53:52 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = {'pk': 773}
2012-08-27 14:53:52 ERROR gm.emr
(/usr/share/gnumed/Gnumed/business/gmEMRStructItems.py::delete_health_issue()
#612): cannot delete health issue
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/business/gmEMRStructItems.py", line 609, in
delete_health_issue
gmPG2.run_rw_queries(queries = [{'cmd': u'delete from clin.health_issue
where pk=%(pk)s', 'args': {'pk': pk}}])
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
IntegrityError: update or delete on table "health_issue" violates foreign key
constraint "episode_fk_health_issue_fkey" on table "episode"
DETAIL: Key (pk)=(773) is still referenced from table "episode".
2012-08-27 14:53:56 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15580, readonly: False
2012-08-27 14:53:56 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:56 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:53:56 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15581, readonly: False
2012-08-27 14:53:56 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:53:56 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:54:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15582, readonly: False
2012-08-27 14:54:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:54:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:54:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15583, readonly: False
2012-08-27 14:54:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:54:00 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15585, readonly: True
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1447):
access mode [READ ONLY]
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #998):
expecting bytea data of size: [2619] bytes
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #999): using
chunk size of: [0] bytes
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1004): chunk
size [0] bytes: retrieving all data at once
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1010): chunks
to retrieve: [1]
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1011):
remainder to retrieve: [0] bytes
2012-08-27 14:54:09 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1019): failed
to set bytea_output to "escape", not necessary
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<gender_mapper::Herr//Frau::>$]
2012-08-27 14:54:09 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<firstname>$]
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_street::home::>$]
2012-08-27 14:54:09 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_number::home::>$]
2012-08-27 14:54:09 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 14:54:09 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_postcode::home::>$]
2012-08-27 14:54:09 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 14:54:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_location::home::>$]
2012-08-27 14:54:10 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 14:54:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:54:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<firstname>$]
2012-08-27 14:54:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:54:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<date_of_birth::%d.%m.%Y>$]
2012-08-27 14:54:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<progress_notes::a// %s \\ >$]
2012-08-27 14:54:15 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<gender_mapper::Sehr geehrter Herr//Sehr geehrte Frau::>$]
2012-08-27 14:54:15 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 14:54:15 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:54:15 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:54:15 DEBUG gm.docs
(/usr/share/gnumed/Gnumed/pycommon/gmMimeLib.py::get_editor_cmd() #122):
<application/x-latex> editor: [None]
2012-08-27 14:54:15 DEBUG gm.docs
(/usr/share/gnumed/Gnumed/pycommon/gmMimeLib.py::get_editor_cmd() #122):
<application/x-tex> editor: [/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4-instance.tex']
2012-08-27 14:54:15 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4-instance.tex'<<<
2012-08-27 14:54:15 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:54:15 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0]
2012-08-27 14:54:15 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4-instance.tex'<<<
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:54:29 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #896):
ignoring <format> directive [None], generating PDF
2012-08-27 14:54:29 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #900): LaTeX
sandbox directory: [/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4]
2012-08-27 14:54:29 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #903): CWD:
[/home/marc]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4/gm-L-Template-brizn4-instance.tex<<<
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:54:29 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4/gm-L-Template-brizn4-instance.tex<<<
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4/gm-L-Template-brizn4-instance.tex<<<
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:54:29 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4/gm-L-Template-brizn4-instance.tex<<<
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4/gm-L-Template-brizn4-instance.tex<<<
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:54:29 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4/gm-L-Template-brizn4-instance.tex<<<
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:54:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:54:29 DEBUG gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #44): printing
"generic_document": [u'/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4-instance.pdf']
2012-08-27 14:54:29 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 14:54:29 DEBUG gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::_print_files_by_gtklp()
#156): printing with ['gtklp', '-i', '-# 1',
u'/tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4-instance.pdf']
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15598, readonly: False
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15599, readonly: False
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:54:37 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [__on_new_letter] in
[/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at line 1089 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
evt = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f970> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [print_doc_from_template] in
[/usr/share/gnumed/Gnumed/wxpython/gmFormWidgets.py] at line 86 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
parent = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
keep_a_copy = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
form = <Gnumed.business.gmForms.cLaTeXForm object at 0x3b50a50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printed = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
template = [cFormTemplate:16]: [u'engine: >>L<<', u'template_type: >>other
letter<<', u'modified_by: >>MaAn<<', 'xmin_paperwork_template: >>105348<<',
u'instance_type: >>sonstiger Arztbrief<<', u'l10n_instance_type: >>sonstiger
Arztbrief<<', 'in_use: >>True<<', u'external_version: >>1.0<<',
'has_template_data: >>True<<', u'filename: >>Rechnung Osteo.tex<<',
u'name_short: >>Osteo<<', u'l10n_template_type: >>sonstiger Brief<<',
'last_modified: >>2012-06-13 12:40:29.055369+02:00<<', 'pk_paperwork_template:
>>16<<', 'pk_template_type: >>12<<', 'has_instances: >>False<<', u'name_long:
>>Rechnung Osteopathie<<']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printable_file = /tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4-instance.pdf
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ph = <Gnumed.wxpython.gmMacro.gmPlaceholderHandler object at 0x2411c50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
jobtype = generic_document
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [add_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinicalRecord.py] at line 319 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'generic_document gedruckt mittels Template [Rechnung
Osteopathie - 1.0]', 'enc': 2934, 'soap': None, 'epi': 1565}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1565
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1267 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x3b21f90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x3b21f90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x3b21f90; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x3b21f90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:54:37 DEBUG gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#165): unhandled exception caught:
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py", line 1089, in
__on_new_letter
gmFormWidgets.print_doc_from_template(parent = self, keep_a_copy = True)
File "/usr/share/gnumed/Gnumed/wxpython/gmFormWidgets.py", line 86, in
print_doc_from_template
episode = episode
File "/usr/share/gnumed/Gnumed/business/gmClinicalRecord.py", line 319, in
add_clin_narrative
encounter_id = self.current_encounter['pk_encounter']
File "/usr/share/gnumed/Gnumed/business/gmClinNarrative.py", line 265, in
create_clin_narrative
rows, idx = gmPG2.run_rw_queries(queries = queries, return_data = True,
get_col_idx = True)
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:54:37 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [__on_new_letter] in
[/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at line 1089 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
evt = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f970> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [print_doc_from_template] in
[/usr/share/gnumed/Gnumed/wxpython/gmFormWidgets.py] at line 86 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
parent = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
keep_a_copy = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
form = <Gnumed.business.gmForms.cLaTeXForm object at 0x3b50a50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printed = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
template = [cFormTemplate:16]: [u'engine: >>L<<', u'template_type: >>other
letter<<', u'modified_by: >>MaAn<<', 'xmin_paperwork_template: >>105348<<',
u'instance_type: >>sonstiger Arztbrief<<', u'l10n_instance_type: >>sonstiger
Arztbrief<<', 'in_use: >>True<<', u'external_version: >>1.0<<',
'has_template_data: >>True<<', u'filename: >>Rechnung Osteo.tex<<',
u'name_short: >>Osteo<<', u'l10n_template_type: >>sonstiger Brief<<',
'last_modified: >>2012-06-13 12:40:29.055369+02:00<<', 'pk_paperwork_template:
>>16<<', 'pk_template_type: >>12<<', 'has_instances: >>False<<', u'name_long:
>>Rechnung Osteopathie<<']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printable_file = /tmp/gnumed/gm-gTIGXI/gm-L-Template-brizn4-instance.pdf
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ph = <Gnumed.wxpython.gmMacro.gmPlaceholderHandler object at 0x2411c50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
jobtype = generic_document
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [add_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinicalRecord.py] at line 319 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'generic_document gedruckt mittels Template [Rechnung
Osteopathie - 1.0]', 'enc': 2934, 'soap': None, 'epi': 1565}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1565
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1275 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x3b21f90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x3b21f90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x3b21f90; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 1>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x3b21f90>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:54:37 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15600, readonly: False
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:54:37 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:55:03 WARNING gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#214): syncing log file for backup to
[/home/marc/gnumed/logs/gnumed-3729_2012-08-27_14-54-37.log]
2012-08-27 14:55:03 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::flush() #116): -------- synced
log file -------------------------------
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15605, readonly: True
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1447):
access mode [READ ONLY]
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #998):
expecting bytea data of size: [2619] bytes
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #999): using
chunk size of: [0] bytes
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1004): chunk
size [0] bytes: retrieving all data at once
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1010): chunks
to retrieve: [1]
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1011):
remainder to retrieve: [0] bytes
2012-08-27 14:55:12 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1019): failed
to set bytea_output to "escape", not necessary
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<gender_mapper::Herr//Frau::>$]
2012-08-27 14:55:12 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<firstname>$]
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_street::home::>$]
2012-08-27 14:55:12 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_number::home::>$]
2012-08-27 14:55:12 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 14:55:12 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_postcode::home::>$]
2012-08-27 14:55:12 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 14:55:13 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_location::home::>$]
2012-08-27 14:55:13 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 14:55:13 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:55:13 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<firstname>$]
2012-08-27 14:55:13 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:55:13 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<date_of_birth::%d.%m.%Y>$]
2012-08-27 14:55:13 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<progress_notes::a// %s \\ >$]
2012-08-27 14:55:14 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<gender_mapper::Sehr geehrter Herr//Sehr geehrte Frau::>$]
2012-08-27 14:55:14 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 14:55:14 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:55:14 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:55:14 DEBUG gm.docs
(/usr/share/gnumed/Gnumed/pycommon/gmMimeLib.py::get_editor_cmd() #122):
<application/x-latex> editor: [None]
2012-08-27 14:55:14 DEBUG gm.docs
(/usr/share/gnumed/Gnumed/pycommon/gmMimeLib.py::get_editor_cmd() #122):
<application/x-tex> editor: [/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX-instance.tex']
2012-08-27 14:55:14 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX-instance.tex'<<<
2012-08-27 14:55:14 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:55:14 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0]
2012-08-27 14:55:14 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX-instance.tex'<<<
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:55:28 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #896):
ignoring <format> directive [None], generating PDF
2012-08-27 14:55:28 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #900): LaTeX
sandbox directory: [/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX]
2012-08-27 14:55:28 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #903): CWD:
[/home/marc]
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX/gm-L-Template-P4CnPX-instance.tex<<<
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:55:28 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX/gm-L-Template-P4CnPX-instance.tex<<<
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX/gm-L-Template-P4CnPX-instance.tex<<<
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:55:28 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX/gm-L-Template-P4CnPX-instance.tex<<<
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX/gm-L-Template-P4CnPX-instance.tex<<<
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:55:28 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:55:28 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX/gm-L-Template-P4CnPX-instance.tex<<<
2012-08-27 14:55:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:55:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:55:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:55:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:55:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:55:29 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:55:29 DEBUG gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #44): printing
"generic_document": [u'/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX-instance.pdf']
2012-08-27 14:55:29 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 14:55:29 DEBUG gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::_print_files_by_gtklp()
#156): printing with ['gtklp', '-i', '-# 1',
u'/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX-instance.pdf']
2012-08-27 14:55:36 ERROR gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::_print_files_by_gtklp()
#164): <gtklp> returned [254], failed to print
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::find_first_binary() #145):
looking for [gm-print_doc]
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::detect_external_binary()
#98): searching for [gm-print_doc]
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::is_cmd_in_path() #23): cmd:
[gm-print_doc]
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::is_cmd_in_path() #25): dir: []
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::is_cmd_in_path() #31):
${PATH}:
/usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games:/usr/share/gnumed/bin
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::is_cmd_in_path() #38): not
found: /usr/local/bin/gm-print_doc
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::is_cmd_in_path() #35): found
[/usr/bin/gm-print_doc]
2012-08-27 14:55:36 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::detect_external_binary()
#111): found: executable in ${PATH}
2012-08-27 14:55:36 DEBUG gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::_print_files_by_shellscript()
#284): printing with [u'/usr/bin/gm-print_doc', 'generic_document',
u'/tmp/gnumed/gm-gTIGXI/gm-L-Template-P4CnPX-instance.pdf']
2012-08-27 14:55:37 ERROR gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::_print_files_by_shellscript()
#292): <gm_print_doc> returned [254], failed to print
2012-08-27 14:58:00 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:58:00 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=4* -> event.GetSelection()=8
2012-08-27 14:58:00 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:58:00 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=4 -> event.GetSelection()=8*
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15666, readonly: True
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1447):
access mode [READ ONLY]
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #998):
expecting bytea data of size: [2619] bytes
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #999): using
chunk size of: [0] bytes
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1004): chunk
size [0] bytes: retrieving all data at once
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1010): chunks
to retrieve: [1]
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1011):
remainder to retrieve: [0] bytes
2012-08-27 14:58:05 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::bytea2file_object() #1019): failed
to set bytea_output to "escape", not necessary
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<gender_mapper::Herr//Frau::>$]
2012-08-27 14:58:05 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Herr//Frau::>$, discarding length: ><
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<firstname>$]
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_street::home::>$]
2012-08-27 14:58:05 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_street::home::>$, discarding length: ><
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_number::home::>$]
2012-08-27 14:58:05 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_number::home::>$, discarding length: ><
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_postcode::home::>$]
2012-08-27 14:58:05 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_postcode::home::>$, discarding length: ><
2012-08-27 14:58:05 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<adr_location::home::>$]
2012-08-27 14:58:05 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<adr_location::home::>$, discarding length: ><
2012-08-27 14:58:06 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:58:06 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<firstname>$]
2012-08-27 14:58:06 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:58:06 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<date_of_birth::%d.%m.%Y>$]
2012-08-27 14:58:06 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<progress_notes::a// %s \\ >$]
2012-08-27 14:58:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<gender_mapper::Sehr geehrter Herr//Sehr geehrte Frau::>$]
2012-08-27 14:58:10 ERROR gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #294): placeholder
length definition error: $<gender_mapper::Sehr geehrter Herr//Sehr geehrte
Frau::>$, discarding length: ><
2012-08-27 14:58:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<title>$]
2012-08-27 14:58:10 DEBUG gm.scripting
(/usr/share/gnumed/Gnumed/wxpython/gmMacro.py::__getitem__() #225): replacing
[$<lastname>$]
2012-08-27 14:58:10 DEBUG gm.docs
(/usr/share/gnumed/Gnumed/pycommon/gmMimeLib.py::get_editor_cmd() #122):
<application/x-latex> editor: [None]
2012-08-27 14:58:10 DEBUG gm.docs
(/usr/share/gnumed/Gnumed/pycommon/gmMimeLib.py::get_editor_cmd() #122):
<application/x-tex> editor: [/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5-instance.tex']
2012-08-27 14:58:10 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5-instance.tex'<<<
2012-08-27 14:58:10 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:58:10 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0]
2012-08-27 14:58:10 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>/usr/bin/kwrite
'/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5-instance.tex'<<<
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:58:25 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #896):
ignoring <format> directive [None], generating PDF
2012-08-27 14:58:25 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #900): LaTeX
sandbox directory: [/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5]
2012-08-27 14:58:25 DEBUG gm.forms
(/usr/share/gnumed/Gnumed/business/gmForms.py::generate_output() #903): CWD:
[/home/marc]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5/gm-L-Template-lpKwZ5-instance.tex<<<
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:58:25 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5/gm-L-Template-lpKwZ5-instance.tex<<<
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5/gm-L-Template-lpKwZ5-instance.tex<<<
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:58:25 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -draftmode -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5/gm-L-Template-lpKwZ5-instance.tex<<<
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #168):
shell command >>>pdflatex -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5/gm-L-Template-lpKwZ5-instance.tex<<<
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #169):
blocking: True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #170):
acceptable return codes: [0, 1]
2012-08-27 14:58:25 INFO gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #209):
running shell command >>>pdflatex -interaction nonstopmode
/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5/gm-L-Template-lpKwZ5-instance.tex<<<
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #212):
os.system() returned: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #224):
exited via exit(): True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #226):
exit code: [0]
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #228):
normal exit: True
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #229):
dumped core: False
2012-08-27 14:58:25 DEBUG gm.shell
(/usr/share/gnumed/Gnumed/pycommon/gmShellAPI.py::run_command_in_shell() #230):
stopped by signal: False
2012-08-27 14:58:25 DEBUG gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #44): printing
"generic_document": [u'/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5-instance.pdf']
2012-08-27 14:58:25 WARNING gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::print_files() #51): print API
"None" unknown, trying all
2012-08-27 14:58:25 DEBUG gm.printing
(/usr/share/gnumed/Gnumed/pycommon/gmPrinting.py::_print_files_by_gtklp()
#156): printing with ['gtklp', '-i', '-# 1',
u'/tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5-instance.pdf']
2012-08-27 14:58:31 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15679, readonly: False
2012-08-27 14:58:31 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:58:31 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:58:31 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [__on_new_letter] in
[/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at line 1089 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
evt = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f970> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [print_doc_from_template] in
[/usr/share/gnumed/Gnumed/wxpython/gmFormWidgets.py] at line 86 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
parent = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
keep_a_copy = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
form = <Gnumed.business.gmForms.cLaTeXForm object at 0x3be4950>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printed = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
template = [cFormTemplate:16]: [u'engine: >>L<<', u'template_type: >>other
letter<<', u'modified_by: >>MaAn<<', 'xmin_paperwork_template: >>105348<<',
u'instance_type: >>sonstiger Arztbrief<<', u'l10n_instance_type: >>sonstiger
Arztbrief<<', 'in_use: >>True<<', u'external_version: >>1.0<<',
'has_template_data: >>True<<', u'filename: >>Rechnung Osteo.tex<<',
u'name_short: >>Osteo<<', u'l10n_template_type: >>sonstiger Brief<<',
'last_modified: >>2012-06-13 12:40:29.055369+02:00<<', 'pk_paperwork_template:
>>16<<', 'pk_template_type: >>12<<', 'has_instances: >>False<<', u'name_long:
>>Rechnung Osteopathie<<']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printable_file = /tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5-instance.pdf
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ph = <Gnumed.wxpython.gmMacro.gmPlaceholderHandler object at 0x2411c50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
jobtype = generic_document
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [add_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinicalRecord.py] at line 319 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'generic_document gedruckt mittels Template [Rechnung
Osteopathie - 1.0]', 'enc': 2934, 'soap': None, 'epi': 1565}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1565
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1267 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298de50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298de50; closed: 0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x3c0cfb0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x3c0cfb0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x3c0cfb0; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x3c0cfb0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298de50; closed: 0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:58:31 DEBUG gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#165): unhandled exception caught:
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py", line 1089, in
__on_new_letter
gmFormWidgets.print_doc_from_template(parent = self, keep_a_copy = True)
File "/usr/share/gnumed/Gnumed/wxpython/gmFormWidgets.py", line 86, in
print_doc_from_template
episode = episode
File "/usr/share/gnumed/Gnumed/business/gmClinicalRecord.py", line 319, in
add_clin_narrative
encounter_id = self.current_encounter['pk_encounter']
File "/usr/share/gnumed/Gnumed/business/gmClinNarrative.py", line 265, in
create_clin_narrative
rows, idx = gmPG2.run_rw_queries(queries = queries, return_data = True,
get_col_idx = True)
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:58:31 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [__on_new_letter] in
[/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at line 1089 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
evt = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f970> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [print_doc_from_template] in
[/usr/share/gnumed/Gnumed/wxpython/gmFormWidgets.py] at line 86 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
parent = <Gnumed.wxpython.gmGuiMain.gmTopLevelFrame; proxy of <Swig Object
of type 'wxFrame *' at 0x2ec5f70> >
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pat = <Gnumed.business.gmPerson.gmCurrentPatient object at 0x2a3c250>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
keep_a_copy = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
form = <Gnumed.business.gmForms.cLaTeXForm object at 0x3be4950>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printed = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
template = [cFormTemplate:16]: [u'engine: >>L<<', u'template_type: >>other
letter<<', u'modified_by: >>MaAn<<', 'xmin_paperwork_template: >>105348<<',
u'instance_type: >>sonstiger Arztbrief<<', u'l10n_instance_type: >>sonstiger
Arztbrief<<', 'in_use: >>True<<', u'external_version: >>1.0<<',
'has_template_data: >>True<<', u'filename: >>Rechnung Osteo.tex<<',
u'name_short: >>Osteo<<', u'l10n_template_type: >>sonstiger Brief<<',
'last_modified: >>2012-06-13 12:40:29.055369+02:00<<', 'pk_paperwork_template:
>>16<<', 'pk_template_type: >>12<<', 'has_instances: >>False<<', u'name_long:
>>Rechnung Osteopathie<<']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
printable_file = /tmp/gnumed/gm-gTIGXI/gm-L-Template-lpKwZ5-instance.pdf
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ph = <Gnumed.wxpython.gmMacro.gmPlaceholderHandler object at 0x2411c50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
jobtype = generic_document
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [add_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinicalRecord.py] at line 319 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1565]: ['episode_open: >>False<<',
'episode_modified_when: >>2012-08-27 14:54:37.528507+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description:
>>administration<<', u'issue_active: NULL', 'pk_episode: >>1565<<',
u'health_issue: NULL', 'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27
14:02:31.337221+02:00<<', 'started_last: >>2012-08-27 14:02:31.317690+02:00<<',
u'pk_health_issue: NULL', u'summary: NULL', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111305<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'generic_document gedruckt mittels Template [Rechnung
Osteopathie - 1.0]', 'enc': 2934, 'soap': None, 'epi': 1565}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1565
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = generic_document gedruckt mittels Template [Rechnung Osteopathie
- 1.0]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1275 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298de50>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298de50; closed: -1>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x3c0cfb0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x3c0cfb0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}, {'cmd': u"\n\t\t\tSELECT *, xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1565,
u'generic_document gedruckt mittels Template [Rechnung Osteopathie - 1.0]',
None]}
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x3c0cfb0; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 1>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x3c0cfb0>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298de50; closed: -1>
2012-08-27 14:58:31 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1565, u'generic_document gedruckt mittels Template
[Rechnung Osteopathie - 1.0]', None]
2012-08-27 14:58:41 WARNING gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#214): syncing log file for backup to
[/home/marc/gnumed/logs/gnumed-3729_2012-08-27_14-58-31.log]
2012-08-27 14:58:41 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::flush() #116): -------- synced
log file -------------------------------
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=8* -> event.GetSelection()=9
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=8 -> event.GetSelection()=9*
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=9* -> event.GetSelection()=8
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:58:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=9 -> event.GetSelection()=8*
2012-08-27 14:59:02 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:59:02 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=8* -> event.GetSelection()=7
2012-08-27 14:59:02 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:59:02 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=8 -> event.GetSelection()=7*
2012-08-27 14:59:03 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:59:03 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=7* -> event.GetSelection()=5
2012-08-27 14:59:03 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:59:03 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=7 -> event.GetSelection()=5*
2012-08-27 14:59:10 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:59:10 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=5* -> event.GetSelection()=4
2012-08-27 14:59:10 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:59:10 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=5 -> event.GetSelection()=4*
2012-08-27 14:59:10 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15687, readonly: False
2012-08-27 14:59:10 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:10 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:59:43 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:59:43 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=4* -> event.GetSelection()=9
2012-08-27 14:59:43 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:59:43 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=4 -> event.GetSelection()=9*
2012-08-27 14:59:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#152): just before switching notebook tabs
2012-08-27 14:59:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changing()
#160): event.GetOldSelection()=9* -> event.GetSelection()=5
2012-08-27 14:59:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#206): just after switching notebook tabs
2012-08-27 14:59:44 DEBUG gm.ui
(/usr/share/gnumed/Gnumed/wxpython/gmHorstSpace.py::_on_notebook_page_changed()
#212): event.GetOldSelection()=9 -> event.GetSelection()=5*
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15700, readonly: False
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15701, readonly: False
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15702, readonly: False
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15703, readonly: False
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:59:53 ERROR gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::run_rw_queries() #1266): error
running RW query
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1236 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1566]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:59:53.164581+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt<<',
u'issue_active: NULL', 'pk_episode: >>1566<<', u'health_issue: NULL',
'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<',
'started_last: >>2012-08-27 14:02:31.317690+02:00<<', 'pk_health_issue:
>>772<<', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111310<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1566}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1566
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1566,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1267 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x36f5820>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1566, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x36f5820>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1566,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1566,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x36f5820; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x36f5820>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: 0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1566, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:59:53 DEBUG gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::handle_uncaught_exception_wx()
#165): unhandled exception caught:
Traceback (most recent call last):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1236, in
_on_save_note_button_pressed
gmTools.none_if(self._TCTRL_rfe.GetValue().strip(), u'')
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1419, in
save_current_editor
if not page.save(emr = emr, episode_name_candidates =
episode_name_candidates, encounter = encounter):
File "/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py", line 1645, in
save
encounter_id = encounter
File "/usr/share/gnumed/Gnumed/business/gmClinNarrative.py", line 265, in
create_clin_narrative
rows, idx = gmPG2.run_rw_queries(queries = queries, return_data = True,
get_col_idx = True)
File "/usr/share/gnumed/Gnumed/pycommon/gmPG2.py", line 1264, in
run_rw_queries
curs.execute(query['cmd'], args)
File "/usr/lib/python2.7/dist-packages/psycopg2/extras.py", line 123, in
execute
return _cursor.execute(self, query, vars)
OperationalError: could not extend file "base/150128/143772": No space left on
device
TIP: Check free disk space.
2012-08-27 14:59:53 DEBUG gm.cfg
(/usr/share/gnumed/Gnumed/pycommon/gmCfg2.py::get() #314): option
[internal::debug] found in source [internal]
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #148): stack
trace follows:
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #149): (locals
by frame, outmost frame first)
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_module_as_main] in [/usr/lib/python2.7/runpy.py] at line
162 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = Gnumed.gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
alter_argv = 1
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
main_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_run_code] in [/usr/lib/python2.7/runpy.py] at line 72 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_loader = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
code = <code object <module> at 0x7fcbd2a28bb0, file
"/usr/share/gnumed/Gnumed/gnumed.py", line 50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
run_globals = {'_known_short_options': u'h?V', 'no_config_files': u'\nGNUmed
startup: Missing configuration
files.\n--------------------------------------------\n\nNone of the below
candidate configuration\nfiles could be found:\n\n %s\n\nCannot run GNUmed
without any of them.\n', 'gmI18N': <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>, '_old_sig_term': None,
'current_client_version': u'1.2.1', '_known_long_options': [u'debug', u'slave',
u'skip-update-check', u'profile=', u'text-domain=', u'log-file=',
u'conf-file=', u'lang-gettext=', u'ui=', u'override-schema-check',
u'local-import', u'help', u'version', u'hipaa'], 'ui_type': 'wxp',
'setup_signal_handlers': <function setup_signal_handlers at 0x108da28>,
'setup_cli': <function setup_cli at 0x108d938>, '_known_ui_types': [u'web',
u'wxp', u'chweb'], 'shutil': <module 'shutil' from
'/usr/lib/python2.7/shutil.pyc'>, 'gmLog2': <module 'Gnumed.pycommon.gmLog2'
from '/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>, 'gmGuiMain': <module
'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>, 'current_client_branch':
u'1.2', 'setup_logging': <function setup_logging at 0x108d7d0>,
'setup_ui_type': <function setup_ui_type at 0x108dd70>, '__package__':
'Gnumed', 'platform': <module 'platform' from
'/usr/lib/python2.7/platform.pyc'>, 'gmDateTime': <module
'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>, 'handle_version_request':
<function handle_version_request at 0x108db90>, 'shutdown_tmp_dir': <function
shutdown_tmp_dir at 0x108df50>, 'missing_cli_config_file': u'\nGNUmed startup:
Missing configuration file.\n-------------------------------------------\n\nYou
explicitly specified a configuration file\non the command
line:\n\n\t--conf-file=%s\n\nThe file does not exist, however.\n',
'__version__': '$Revision: 1.169 $', '__doc__': 'GNUmed client
launcher.\n\nThis is the launcher for the GNUmed GUI client. It takes\ncare of
all the pre- and post-GUI runtime environment setup.\n\n--quiet\n Be extra
quiet and show only _real_ errors in the log.\n--debug\n Pre-set the [debug
mode] checkbox in the login dialog to\n increase verbosity in the log file.
Useful for, well, debugging :-)\n--slave\n Pre-set the [enable remote control]
checkbox in the login\n dialog to enable the XML-RPC remote control
feature.\n--hipaa\n Enable HIPAA functionality which has user
impact.\n--profile=<file>\n Activate profiling and write profile data to
<file>.\n--text-domain=<text domain>\n Set this to change the name of the
language file to be loaded.\n Note, this does not change the directory the file
is searched in,\n only the name of the file where messages are loaded from.
The\n standard textdomain is, of course, "gnumed.mo".\n--log-file=<file>\n Use
this to change the name of the log file.\n See gmLog2.py to find out where the
standard log file would\n end up.\n--conf-file=<file>\n Use configuration file
<file> instead of searching for it in\n standard
locations.\n--lang-gettext=<language>\n Explicitly set the language to use in
gettext translation. The very\n same effect can be achieved by setting the
environment variable $LANG\n from a launcher script.\n--override-schema-check\n
Continue loading the client even if the database schema version\n and the
client software version cannot be verified to be
compatible.\n--skip-update-check\n Skip checking for client updates. This is
useful during development\n and when the update check URL is unavailable
(down).\n--local-import\n Adjust the PYTHONPATH such that GNUmed can be run
from a local source tree.\n--ui=<ui type>\n Start an alternative UI. Defaults
to wxPython if not specified.\n Valid values: chweb (CherryPy), wxp (wxPython),
web (ProxiedWeb)\n--version, -V\n Show version information.\n--help, -h, or
-?\n Show this help.\n', 'setup_paths_and_files': <function
setup_paths_and_files at 0x108dc08>, 'setup_date_time': <function
setup_date_time at 0x108dc80>, 'stat': <module 'stat' from
'/usr/lib/python2.7/stat.pyc'>, 'setup_locale': <function setup_locale at
0x108daa0>, 'profile_file': None, '__license__': 'GPL v2 or later (details at
http://www.gnu.org)', 'log_startup_info': <function log_startup_info at
0x108d848>, '__builtins__': <module '__builtin__' (built-in)>, '__file__':
'/usr/share/gnumed/Gnumed/gnumed.py', 'setup_local_repo_path': <function
setup_local_repo_path at 0x108d758>, '__author__': 'H. Herb <address@hidden>,
K. Hilbert <address@hidden>, I. Haywood <address@hidden>', 'sys': <module 'sys'
(built-in)>, 'gmHooks': <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>, 'gmTools': <module
'Gnumed.pycommon.gmTools' from '/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>,
'_log': <logging.Logger object at 0x10a9390>, '__name__': '__main__', 'gmPG2':
<module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>, 'shutdown_backend': <function
shutdown_backend at 0x108de60>, 'handle_sig_term': <function handle_sig_term at
0x108d9b0>, 'import_error_sermon': '\nGNUmed startup: Cannot load GNUmed Python
modules !\n---------------------------------------------------\nCRITICAL ERROR:
Program halted.\n\nPlease make sure you have:\n\n 1) the required third-party
Python modules installed\n 2) the GNUmed Python modules linked or installed
into site-packages/\n (if you do not run from a CVS tree the installer
should have taken care of that)\n 3) your PYTHONPATH environment variable set
up correctly\n\nsys.path is currently set to:\n\n %s\n\nIf you are running from
a copy of the CVS tree make sure you\ndid run gnumed/check-prerequisites.sh
with good results.\n\nIf you still encounter errors after checking the
above\nrequirements please ask on the mailing list.\n', '__loader__':
<pkgutil.ImpLoader instance at 0x7fcbd2a2c098>, 'setup_backend': <function
setup_backend at 0x108dde8>, 'logging': <module 'logging' from
'/usr/lib/python2.7/logging/__init__.pyc'>, 'setup_cfg': <function setup_cfg at
0x108dcf8>, 'setup_console_exception_handler': <function
setup_console_exception_handler at 0x108d8c0>, 'signal': <module 'signal'
(built-in)>, 'shutdown_logging': <function shutdown_logging at 0x108ded8>,
'handle_help_request': <function handle_help_request at 0x108db18>, '_cfg':
<Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>, 'setup_python_path':
<function setup_python_path at 0x108d6e0>, 'os': <module 'os' from
'/usr/lib/python2.7/os.pyc'>}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
init_globals = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
pkg_name = Gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_name = __main__
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
mod_fname = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [<module>] in [/usr/share/gnumed/Gnumed/gnumed.py] at line 605
<<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_short_options = h?V
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
no_config_files =
GNUmed startup: Missing configuration files.
--------------------------------------------
None of the below candidate configuration
files could be found:
%s
Cannot run GNUmed without any of them.
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmI18N = <module 'Gnumed.pycommon.gmI18N' from
'/usr/share/gnumed/Gnumed/pycommon/gmI18N.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_old_sig_term = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_version = 1.2.1
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_long_options = [u'debug', u'slave', u'skip-update-check', u'profile=',
u'text-domain=', u'log-file=', u'conf-file=', u'lang-gettext=', u'ui=',
u'override-schema-check', u'local-import', u'help', u'version', u'hipaa']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
ui_type = wxp
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_signal_handlers = <function setup_signal_handlers at 0x108da28>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cli = <function setup_cli at 0x108d938>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_known_ui_types = [u'web', u'wxp', u'chweb']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutil = <module 'shutil' from '/usr/lib/python2.7/shutil.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmLog2 = <module 'Gnumed.pycommon.gmLog2' from
'/usr/share/gnumed/Gnumed/pycommon/gmLog2.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmGuiMain = <module 'Gnumed.wxpython.gmGuiMain' from
'/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
current_client_branch = 1.2
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_logging = <function setup_logging at 0x108d7d0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_ui_type = <function setup_ui_type at 0x108dd70>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__package__ = Gnumed
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
platform = <module 'platform' from '/usr/lib/python2.7/platform.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmDateTime = <module 'Gnumed.pycommon.gmDateTime' from
'/usr/share/gnumed/Gnumed/pycommon/gmDateTime.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_version_request = <function handle_version_request at 0x108db90>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_tmp_dir = <function shutdown_tmp_dir at 0x108df50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
missing_cli_config_file =
GNUmed startup: Missing configuration file.
-------------------------------------------
You explicitly specified a configuration file
on the command line:
--conf-file=%s
The file does not exist, however.
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__version__ = $Revision: 1.169 $
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_paths_and_files = <function setup_paths_and_files at 0x108dc08>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_date_time = <function setup_date_time at 0x108dc80>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
stat = <module 'stat' from '/usr/lib/python2.7/stat.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_locale = <function setup_locale at 0x108daa0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
profile_file = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__license__ = GPL v2 or later (details at http://www.gnu.org)
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
log_startup_info = <function log_startup_info at 0x108d848>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__builtins__ = <module '__builtin__' (built-in)>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__file__ = /usr/share/gnumed/Gnumed/gnumed.py
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_local_repo_path = <function setup_local_repo_path at 0x108d758>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__author__ = H. Herb <address@hidden>, K. Hilbert <address@hidden>, I. Haywood
<address@hidden>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
sys = <module 'sys' (built-in)>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmHooks = <module 'Gnumed.pycommon.gmHooks' from
'/usr/share/gnumed/Gnumed/pycommon/gmHooks.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmTools = <module 'Gnumed.pycommon.gmTools' from
'/usr/share/gnumed/Gnumed/pycommon/gmTools.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_log = <logging.Logger object at 0x10a9390>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__name__ = __main__
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
gmPG2 = <module 'Gnumed.pycommon.gmPG2' from
'/usr/share/gnumed/Gnumed/pycommon/gmPG2.py'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_backend = <function shutdown_backend at 0x108de60>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_sig_term = <function handle_sig_term at 0x108d9b0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
import_error_sermon =
GNUmed startup: Cannot load GNUmed Python modules !
---------------------------------------------------
CRITICAL ERROR: Program halted.
Please make sure you have:
1) the required third-party Python modules installed
2) the GNUmed Python modules linked or installed into site-packages/
(if you do not run from a CVS tree the installer should have taken care of
that)
3) your PYTHONPATH environment variable set up correctly
sys.path is currently set to:
%s
If you are running from a copy of the CVS tree make sure you
did run gnumed/check-prerequisites.sh with good results.
If you still encounter errors after checking the above
requirements please ask on the mailing list.
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
__loader__ = <pkgutil.ImpLoader instance at 0x7fcbd2a2c098>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_backend = <function setup_backend at 0x108dde8>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
logging = <module 'logging' from '/usr/lib/python2.7/logging/__init__.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_cfg = <function setup_cfg at 0x108dcf8>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_console_exception_handler = <function setup_console_exception_handler at
0x108d8c0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
signal = <module 'signal' (built-in)>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
shutdown_logging = <function shutdown_logging at 0x108ded8>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
handle_help_request = <function handle_help_request at 0x108db18>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
_cfg = <Gnumed.pycommon.gmCfg2.gmCfgData object at 0x12fbe90>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
setup_python_path = <function setup_python_path at 0x108d6e0>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
os = <module 'os' from '/usr/lib/python2.7/os.pyc'>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [main] in [/usr/share/gnumed/Gnumed/wxpython/gmGuiMain.py] at
line 3424 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
app = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 8010
<<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [MainLoop] in
[/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode/wx/_core.py] at line 7306
<<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = (<Gnumed.wxpython.gmGuiMain.gmApp; proxy of <Swig Object of type
'wxPyApp *' at 0x2541d40> >,)
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
kwargs = {}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [_on_save_note_button_pressed] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1236 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapPluginPnl; proxy of
<Swig Object of type 'wxPanel *' at 0x318f9f0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
event = <wx._core.CommandEvent; proxy of <Swig Object of type
'wxCommandEvent *' at 0x7fff7c82f7e0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save_current_editor] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1419 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page_idx = 1
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteInputNotebook; proxy
of <Swig Object of type 'wxNotebook *' at 0x31987b0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
page = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [save] in
[/usr/share/gnumed/Gnumed/wxpython/gmNarrativeWidgets.py] at line 1645 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode = [cEpisode:1566]: ['episode_open: >>True<<',
'episode_modified_when: >>2012-08-27 14:59:53.164581+02:00<<',
u'diagnostic_certainty_classification_issue: NULL', u'description: >>Shunt<<',
u'issue_active: NULL', 'pk_episode: >>1566<<', u'health_issue: NULL',
'pk_patient: >>780<<', 'last_affirmed: >>2012-08-27 14:02:31.337221+02:00<<',
'started_last: >>2012-08-27 14:02:31.317690+02:00<<', 'pk_health_issue:
>>772<<', u'summary: >><<', 'started_first: >>2012-08-27
14:02:31.317690+02:00<<', 'pk_generic_codes: >>[]<<', 'xmin_episode:
>>111310<<', 'pk_encounter: >>2934<<', u'diagnostic_certainty_classification:
NULL', u'episode_modified_by: >>maan<<', u'issue_clinically_relevant: NULL']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <Gnumed.wxpython.gmNarrativeWidgets.cSoapNoteExpandoEditAreaPnl;
proxy of <Swig Object of type 'wxScrolledWindow *' at 0x398e4f0> >
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_name_candidates = [None, None, u'']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
note = ['s', u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_notes = []
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
emr = <Gnumed.business.gmClinicalRecord.cClinicalRecord object at
0x2a9b210>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter = 2934
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [create_clin_narrative] in
[/usr/share/gnumed/Gnumed/business/gmClinNarrative.py] at line 265 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = {'narr': u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 'enc': 2934, 'soap': 's', 'epi': 1566}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
idx = {'xmin_clin_narrative_14': 14, 'pk_episode': 8, 'soap_cat': 3,
'pk_narrative': 6, 'pk_health_issue': 7, 'pk_patient': 0, 'provider': 2,
'pk_encounter': 9, 'row_version': 12, 'xmin_clin_narrative': 10,
'modified_when': 11, 'narrative': 4, 'date': 1, 'pk_generic_codes': 13,
'pk_item': 5}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
soap_cat = s
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
cmd =
SELECT
*, xmin_clin_narrative
FROM clin.v_pat_narrative
WHERE
pk_encounter = %(enc)s
AND
pk_episode = %(epi)s
AND
soap_cat = %(soap)s
AND
narrative = %(narr)s
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
episode_id = 1566
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
narrative = Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk,
schon vorher gehabt, trägt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunfälle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, groÃes Myom, zunehmend menstruationsabhängig
Sz,
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
rows = []
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1566,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
encounter_id = 2934
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [run_rw_queries] in
[/usr/share/gnumed/Gnumed/pycommon/gmPG2.py] at line 1275 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
end_tx = False
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs_close = <built-in method close of DictCursor object at 0x298dc50>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
verbose = False
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
curs = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_close = <built-in method close of DictConnection object at 0x36f5820>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
args = [2934, 1566, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
link_obj = None
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_rollback = <built-in method rollback of DictConnection object at 0x36f5820>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
queries = [{'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1566,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}, {'cmd': u"\n\t\t\tSELECT *,
xmin_clin_narrative\n\t\t\tFROM
clin.v_pat_narrative\n\t\t\tWHERE\n\t\t\t\tpk_narrative =
currval(pg_get_serial_sequence('clin.clin_narrative', 'pk'))"}]
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
get_col_idx = True
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query = {'cmd': u'\n\t\t\tINSERT INTO
clin.clin_narrative\n\t\t\t\t(fk_encounter, fk_episode, narrative,
soap_cat)\n\t\t\tVALUES\n\t\t\t\t(%s, %s, %s, lower(%s))', 'args': [2934, 1566,
u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re Kiefergelenk, schon vorher
gehabt, tr\xe4gt Knirscherschiene nachts seit ca. 1a,
Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a Auffahrunf\xe4lle
mit Schleudertrauma, ventriculacardialer Shunt re bei Spina bifida bei Geburt,
NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in Kindheit, keine
Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']}
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
return_data = True
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn = <connection object at 0x36f5820; dsn: 'dbname=gnumed_v17
port=5432 user=maan password=xxxxxxxxxxx sslmode=prefer', closed: 1>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
conn_commit = <built-in method commit of DictConnection object at 0x36f5820>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #155): >>>
execution frame [execute] in
[/usr/lib/python2.7/dist-packages/psycopg2/extras.py] at line 123 <<<
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
query =
INSERT INTO clin.clin_narrative
(fk_encounter, fk_episode, narrative, soap_cat)
VALUES
(%s, %s, %s, lower(%s))
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
self = <cursor object at 0x298dc50; closed: -1>
2012-08-27 14:59:53 DEBUG gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::log_stack_trace() #170):
vars = [2934, 1566, u'Kiefersperre vor ca. 4w, seitdem Sz im Bereich re
Kiefergelenk, schon vorher gehabt, tr\xe4gt Knirscherschiene nachts seit ca.
1a, Schulter-Nackenverspannungen li > re, letztes Jahr + vor 10a
Auffahrunf\xe4lle mit Schleudertrauma, ventriculacardialer Shunt re bei Spina
bifida bei Geburt, NPP in C3/4 + C5/6, Ischias li, keine Medi, Treppensturz in
Kindheit, keine Kinder, SS nicht mgl. gewesen, gro\xdfes Myom, zunehmend
menstruationsabh\xe4ngig Sz,', 's']
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15704, readonly: False
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15705, readonly: False
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1414): new
database connection, backend PID: 15706, readonly: False
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_raw_connection() #1453):
access mode [READ WRITE]
2012-08-27 14:59:53 DEBUG gm.db
(/usr/share/gnumed/Gnumed/pycommon/gmPG2.py::get_connection() #1515): client
string encoding [UTF8], isolation level [serializable], time zone [posix/Poland]
2012-08-27 15:00:43 ERROR gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::mail_log()
#371): Error on Saving new encounter entry
2012-08-27 15:00:43 WARNING gm.gui
(/usr/share/gnumed/Gnumed/wxpython/gmExceptionHandlingWidgets.py::mail_log()
#372): syncing log file for emailing
2012-08-27 15:00:43 CRITICAL gm.logging
(/usr/share/gnumed/Gnumed/pycommon/gmLog2.py::flush() #116): -------- synced
log file -------------------------------
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- [Gnumed-bugs] <bug>: Error on Saving new encounter entry,
MaAn = maan <=