Re: [O] Mouse-over on bibliographic citation

[John Kitchin]

Can you add this to your org-file, run it and tell me what the output is:

#+BEGIN_SRC emacs-lisp
(org-ref-find-bibliography)
#+END_SRC

Also run M-x org-ref to see what bibliography org-ref thinks it is
using in that file. There were some recent changes to
(org-ref-find-bibliography) that might be causing this problem.

Do you have a bibliography link in the file you are working in?


Sharon Kimble writes:

> John Kitchin <address@hidden> writes:
>
>> this is a bug in the current org-mode 9.0.8. You have to revert it to org 
>> 9.0.7 for now. It has been fixed, but I am not sure when it will show up.
>
> Thanks for this John.
>
> I can confirm that with today's release of 'org-mode plus contribs' the
> desired over effect has returned, but with a caveat - its showing the
> wrong bibliographic entry! I have this in my config file -
>
> --8<---------------cut here---------------start------------->8---
> #+begin_src emacs-lisp
> (require 'org-ref)
> (setq reftex-default-bibliography '("~/research/death/death.bib"))
>
> ;; see org-ref for use of these variables
> (setq org-ref-bibliography-notes "~/research/notes.org"
>       org-ref-default-bibliography '("~/research/death/death.bib")
>       org-ref-pdf-directory "~/research/death/pdfs")
>
> (setq bibtex-completion-bibliography "~/research/death/death.bib"
>       bibtex-completion-library-path "~/research/death/pdfs"
>       bibtex-completion-notes-path "~/research/death/helm-bibtex-notes")
> #+end_src
> [2016-09-20 Tue 04:15]
> [2017-01-17 Tue 11:34]
> --8<---------------cut here---------------end--------------->8---
>
> Going back to '(cite:0072)' the mouse-over now shows 'NHS, , /Ovarian
> cancer/ (2015).', which is the reference in 'death.bib'!
>
> I'm using the exact same code-block as pre-the updated org-mode, and
> I've restarted emacs, so I'm not sure what ought to be changed, if
> anything, but I'm unhappy with what its now showing as its not correct.
>
> Do I need to revamp my code-block, and if so, how please?
>
> Thanks
> Sharon.
>
>>
>> On Wed, Jun 21, 2017 at 5:50 PM, Sharon Kimble <address@hidden> wrote:
>>
>>     I've got this strange problem and I'm not sure when it started, possibly
>>     when this new computer was first put to use last Friday afternoon with a
>>     fresh install of Debian 9, or maybe before then, I'm not sure.
>>
>>     Anyway, whenever I mouse-over a bibliographic citation in an org-mode
>>     document, it used to say for (cite:0072) '\Hair loss, 2015,
>>     http://www.regrowth.com/hair-loss-articles/ \' but now just shows
>>     'LINK:cite:0072'.
>>
>>     I am using 'org-ref' which is up to date, as is org-mode, and both from
>>     ELPA.
>>
>>     This is what my bibliography item actually is -
>>
>>     --8<---------------cut here---------------start------------->8---
>>     @Online{0072,
>>      Title          = {Hair loss},
>>      Author         = {regrowth},
>>      Url           = {http://www.regrowth.com/hair-loss-articles/},
>>      Year          = {2015}
>>     }
>>     --8<---------------cut here---------------end--------------->8---
>>
>>     So how can I regain my previous mouse-over abilities please?
>>
>>     Thanks
>>     Sharon.
>>     --
>>     A taste of linux = http://www.sharons.org.uk
>>     TGmeds = http://www.tgmeds.org.uk
>>     DrugFacts = https://www.drugfacts.org.uk
>>     Debian 9.0, fluxbox 1.3.5-2, emacs 25.1.1, org-mode 9.0.7
>>


--
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu