Re: PSPP-BUG: Bug Report for PSPP 0.7.8 on Fedora

[Ben Pfaff]

Eliana <address@hidden> writes:

> this is a bug report, running pspp 0.7.8 on Fedora 12.  Tried running
> QUICK CLUSTER
>
> input program and sample data file are attached.
>
> ran from command line with
>
> cat testprogram.txt | pspp

When I run this as provided, with the latest PSPP from the Git
repository, I get the following, without such a report.

What full output do you get?

----------------------------------------------------------------------

cb-me-20120221sorted-1.csv:1.16-1.25: warning: Data for variable CHROM is not
valid as format F: Field contents are not numeric.

cb-me-20120221sorted-1.csv:1.27-1.40: warning: Data for variable START is not
valid as format F: Field contents are not numeric.

cb-me-20120221sorted-1.csv:1.42-1.53: warning: Data for variable STOP is not
valid as format F: Field contents are not numeric.

cb-me-20120221sorted-1.csv:1.55-1.66: warning: Data for variable SIZE is not
valid as format F: Field contents are not numeric.

cb-me-20120221sorted-1.csv:1.68-1.80: warning: Data for variable SNPS is not
valid as format F: Field contents are not numeric.

Valid cases = 10; cases with missing value(s) = 1.
+--------#-+--------+--------+--------+--------+--------+----+--------+----+
|Variable#N|  Mean  |  S.E.  | Std Dev|Variance|Kurtosis|S.E.|Skewness|S.E.|
|        # |        |  Mean  |        |        |        |Kurt|        |Skew|
#========#=#========#========#========#========#========#====#========#====#
|CHROM   #9|    1.00|     .00|     .00|     .00|       .|   .|       .|   .|
|        # |        |        |        |        |        |    |        |    |
|START   #9|83697338|21697219|65091658|4.2E+015|    -.38|1.40|    1.01| .72|
|STOP    #9|86437786|21788956|65366868|4.3E+015|    -.36|1.40|    1.01| .72|
|SIZE    #9|    2.35|     .44|    1.31|    1.73|    7.25|1.40|    2.60| .72|
|SNPS    #9|  666.67|   83.33|  250.00|62500.00|    6.62|1.40|    2.46| .72|
+--------#-+--------+--------+--------+--------+--------+----+--------+----+

+--------#--------+--------+--------+--------+
|Variable#  Range | Minimum| Maximum|   Sum  |
|        #        |        |        |        |
#========#========#========#========#========#
|CHROM   #     .00|    1.00|    1.00|    9.00|
|        #        |        |        |        |
|START   #1.7E+008|20275685|1.9E+008|7.5E+008|
|STOP    #1.7E+008|21826023|2.0E+008|7.8E+008|
|SIZE    #    4.31|    1.42|    5.73|   21.18|
|SNPS    #  800.00|  500.00| 1300.00| 6000.00|
+--------#--------+--------+--------+--------+

Final Cluster Centers
#=====#==================#
#     |      Cluster     #
#     +--------+---------#
#     |    1   |    2    #
#     +--------+---------#
#START|27491087|111800463#
#STOP |29785241|114764058#
#SIZE |  2.06  |   2.50  #
#SNPS |   567  |   717   #
#=====#========#=========#

Number of Cases in each Cluster
#=======#=#=#
#Cluster|1|3#
#       |2|6#
#       | | #

#       | | #
#Valid  | |9#
#=======#=#=#

testprogram.txt:18.30: error: FREQUENCIES: Syntax error at `-': expecting end
of command.

testprogram.txt:23.30: error: EXAMINE: Syntax error at `-': expecting end of
command.

-- 
Ben Pfaff 
http://benpfaff.org